Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0923 ATGGCCAACTTAGCAAGTCCAACAGGGGATTTCTCATGGATTTGTCTCAGAGATTTTGATTTCACTTCCTTTTGCACTCATAGGAGCATCATAGACATTGTAAATGTGCTCTTTCTCTGTGCTTTTTACGTATCTTTTCTTAGCAGTTTGATCAGAAAAAGCAATGCACGTGATAGCCACAGAAAGGGATGGGTTTGTTCAGCTATCTCAGTCTGTTGTTCTCTTATAAGCATGGCTTATTTCATTAATGGACTATGGTATCTTATTTCCAAATCTGAAGACTTTAGGCAGCTGACGTGGTTAGTTTACTTTTTCAGAGGACTAGTCTGGATTTCTCTAACAGTTCCTTTGCTATTCAAGAGATCTAAATGTATACAAGTTCTAAACCTTGTTTGGTGGGTCTCTACATGCATACTCGTTTCAGCTCTCAATACTGAGATTCTGTTAAAAGATCATAACATTCAAATACTTGATCTGGTTCAATGGCCTTTACATTTTTTACTTGTTTTTTGTGCCCTCCAAAGCCTTTATGTTGCATCTCAAAGAACTCAAAATACCACTATATCAGAGCCTCTTTTAGCTCAAAAGGATGAAAATAAACAATCAAAACTTGCACGTGCCAATTTTCTCAGCAAAATGACTTTCTCGTGGATTAATTCCTTATTGAAATTGGGATTTTCAAAGCCATTTGCTCTTGAAGACATCCCATCTCTTGTTTCTGAAGATGAAGCTGCTTTAGCCTACCAAAAGTTTTCTCATGTATGGGATTCCTTTTTAAGGGATAGAAGCAAAAACAACAGTACTAAAAACTTGGTTATGTGGTCCATATTAAGAGTTTACATGAAAGAGAACGTTCTCGTAGCAATCCTGGCATTGCTCAGGACAATTGCTGTAGTAGTTTCTCCTTTGGTTCTCTATGCTCTTGTGAACTTTTCAAATAGTAAAGAGGAAAATCTAAAAGAGGGTCTGGTCATACTTGGTTGTCTGATTATATGCAAGGTAATTGAATCCTTGCCTCAAAGGCACTTCTATTTTCAATCGAGAAGGTCAGGAATGAGAATGAGATCTGCTTTAATGGTGGCAATACATGACAAGCAGTTGAAGCTTTCAAGTGCAGCCAGAAGAAGACACTCAACTGGGGAGATAGTGAATTACATAGCAGTTGATGCATATAGAATGGGACAATTTCCTTGGTGGTTTCACACCACATGGACTTCAGTAGTACAACTTTTTCTATCTTTTGGGGTTCTATTTGGGGTTGTTGGTCTTGGTGCTCTTCTCGGTTTAGTCCCCATACTGATTTGTGGGCTTCTTAATATGCCCTTTGCAAAGATCATTCAAAAGTGTCTGTCAGAATTTATGGTTGCACAGGATGAACGACTAAGATCAACTTCAGAGATCCTAAATAATATGAAAATCATAAAGTTGCAATCTTGGGAGGAAAAGTTCAAGACCTCGGTGGAAAACCTTCGTGCCAAAGAGTTCAAGTGGCTGGCTAAGGCACAGTTCATAAAAGCTCATGGATCATTTATCTATTGGATGTCTCCAACGATTGTTTCCTCAGTAATCTTCTTAGGATGTGCTCTTTTGAAAAGTGCCCCTTTAAATGCTGGAACCATATTCACTATTCTTGCTACTTTGAGGAGCATGAGTGATCCTGTTAGATTTATTCCAGAGGCTCTTTCTGTTATAATCCAAGTCAAGGTCTCCTTTGATCGTCTCAATACCTTTTTGCTTGATGATGAGCTAAGTGATGACATCACTGGAAGACACTTAATGCAAAATTCAGTTAATAGTGTGGAAATTCAAGCAGCTGGAAAATCATCCCTCATATGTGCAATACTTGGCGAGATACCCAAAATTTCAGGAACTGTTAAGGTGGGTGGAACCGTAGCCTATGTTTCTCAAACATCTTGGATCCAAAGTGGGACAATTCGAGATAATATACTCTTTGGCAAACCTATGGATGAAACCAGATATGAGAACGCCATAAAAGTATGTGCCTTGGATAAGGATATGAATGCTTTTAGCCATGGTGATCTTACAGAAATAGGTCAGCGAGGAATCAACTTGAGTGGAGGTCAGAAGCAAAGGATTCAACTGGCTCGTGCAGTATATAATGATGCTGAAGTTTATCTCTTAGATGACCCTTTCAGTGCTGTGGATGCACATACTGCTGCTATTCTATTCAATGATTGTGTCTTGAATTCTCTAAGGAAGAAAACTGTAATTCTAGTGACTCATCAAGTGGAGTTTCTCTCACAAGTTGATAAAATCCTTGTCATGGAGGGTGGAGTAGTTACTCAATCTGGATGTTATGAAGATCTTCTCACAGAAGGGACAGCCTTTAAACAACTTGTAAATGCCCATAGAGAAGCAGTATCAGGGTCAGATCAAAACAATGAGATCCCTGGAGAATTTGAGGATGTGATAAATGTTATTCGTCCATTGGAGTCTCATGAATTTCATCTCTCTGAGGATCATAAGACTGAGCAGGTTTCTACCAAAATTCAGGTGTTACAACTTACACAGTCGGAAGAAAAGGAGATTGGTAATGTTGGCTGGAAGCCATTCTGGGATTATCTTTATCTCTCCAATGGATCATTGCTTCTGGGTTTGAACATTTTATCAATGATGGCTTTTATTGGTTTGCAAGCAGTATCAACTTTTTGGCTTGCTCTGGCCCTTGAGGTGCCAAAAGTAACTAATGCCATCTTGATTGGAGTTTATACTACAGTTTCACTTATAAGCGTGGGGTTTGTGTGCATAAGATCTATCGTGGGTGCACATCTTGGATTAAAAGCTTCTACTTCTTTCTTCTCTTGTTTCAATAATGCTATCTTCAAGGCTCCTATGCTCTTCTTTGACTCAACCCCAGTAGGGAGAATTTTAACCCGAGCTTCATCGGATTTGAGTATATTAGACTTTGATATACCTTATGCACTCACCTTTGTAGTAGGTGGTGCAATAGAACTTCTGACAACAATTGGGATAATGGTTTCAGTCACGTGGCAAGTACTTATTGTTGCAGTTCCCGCCTTAATTACTTCTAAATACATTCAGGACTATTATCAAGCCTCTTCAAGGGAACTAACGAGAATCAATGGAACCACAAAAGCTCCAGTCATGAATTTCGCCACCGAGACATCACTAGGAGTGGTGACTGTGAGAGCTTTCAACATCGCAGACAGATTTTACCAAAATTACCTGAAGCTTGTGGACACAGATGCAAAACTTTTCTTTCATTCTAATGTGGCCACAGAATGGTTAATTTTAAGGATTGAAGTACTTCAGAATTTGACACTATTCACGGCAGCTTTACTGCTTGTTCTACTTCCTAAGGGACTTGTGTCCCCAGGCCTTGCAGGACTCTCTCTATCATATGCTTTGTCATTGTCAGAATGCCAAATTTTTCTTAGTACTTGGTTCTGTAATTTATCAAATTATATTGTTTCCGTTGAAAGAATTAAGCAGTTCATTCACATACCAGAAGAGCCTCCTGCAATTGTGGAGAACAGAAAACCTCCTCTTTCATGGCCTTCCAAGGGTAGGATTGAGCTTCAAAATCTTGAGATAAGGTATCGTCCAAATGCTCCTTTGGTCATTAAGGGAATTACATGTACGTTTAAAGAAGGGAGCAGAGTGGGAATTGTAGGGAGGACTGGAAGTGGAAAAAGTACACTTGTAAGTGCTCTGTTTCGGTTGGTTGATCCTGCAAGAGGTGATATTCTTATAGATGGGATCAGCATATTACCAATGGGTTTGAAGGATTTGAGGATGAAGCTCAGCGTTATTCCTCAAGAACCCACTCTTTTCAGGGGTAGCATTAGAACCAACTTGGATCCTCTAGACCTCTACTCTGATGATGAAATATGGAAGGCTTTAGAGAAATGCCAGCTCAAGACAACAGTCGTCAATCTACCAAATCAACTGGACTCTTCTGTGAGTGATGAAGGAGAAAATTGGAGTGTGGGACAGCGCCAACTGTTTTGTCTTGGAAGAGTACTTCTCAAACGGAATAGAATTCTTGTTCTTGATGAGGCTACTGCCTCCATTGATTCTACCACCGACGCCATTTTGCAACGAGTTATTAGACAAGAGTTTGCAAGATGCACAGTTATAACTGTGGCTCACAGAGTTCCAACTGTTATAGATAGTAATATGATCATGGTTCTTTCTTATGGGAAAGTGGTGGAATATGATGAACCTTCAAAGCTTATGGAGACAAACTCTTCTTTCTCTAAACTTGTTGCTGAGTATTGGTCCAGCTGCAGCAAGAACTTCTCCCAAGTTCCAAATCATTAA 4305 0.3951 MANLASPTGDFSWICLRDFDFTSFCTHRSIIDIVNVLFLCAFYVSFLSSLIRKSNARDSHRKGWVCSAISVCCSLISMAYFINGLWYLISKSEDFRQLTWLVYFFRGLVWISLTVPLLFKRSKCIQVLNLVWWVSTCILVSALNTEILLKDHNIQILDLVQWPLHFLLVFCALQSLYVASQRTQNTTISEPLLAQKDENKQSKLARANFLSKMTFSWINSLLKLGFSKPFALEDIPSLVSEDEAALAYQKFSHVWDSFLRDRSKNNSTKNLVMWSILRVYMKENVLVAILALLRTIAVVVSPLVLYALVNFSNSKEENLKEGLVILGCLIICKVIESLPQRHFYFQSRRSGMRMRSALMVAIHDKQLKLSSAARRRHSTGEIVNYIAVDAYRMGQFPWWFHTTWTSVVQLFLSFGVLFGVVGLGALLGLVPILICGLLNMPFAKIIQKCLSEFMVAQDERLRSTSEILNNMKIIKLQSWEEKFKTSVENLRAKEFKWLAKAQFIKAHGSFIYWMSPTIVSSVIFLGCALLKSAPLNAGTIFTILATLRSMSDPVRFIPEALSVIIQVKVSFDRLNTFLLDDELSDDITGRHLMQNSVNSVEIQAAGKSSLICAILGEIPKISGTVKVGGTVAYVSQTSWIQSGTIRDNILFGKPMDETRYENAIKVCALDKDMNAFSHGDLTEIGQRGINLSGGQKQRIQLARAVYNDAEVYLLDDPFSAVDAHTAAILFNDCVLNSLRKKTVILVTHQVEFLSQVDKILVMEGGVVTQSGCYEDLLTEGTAFKQLVNAHREAVSGSDQNNEIPGEFEDVINVIRPLESHEFHLSEDHKTEQVSTKIQVLQLTQSEEKEIGNVGWKPFWDYLYLSNGSLLLGLNILSMMAFIGLQAVSTFWLALALEVPKVTNAILIGVYTTVSLISVGFVCIRSIVGAHLGLKASTSFFSCFNNAIFKAPMLFFDSTPVGRILTRASSDLSILDFDIPYALTFVVGGAIELLTTIGIMVSVTWQVLIVAVPALITSKYIQDYYQASSRELTRINGTTKAPVMNFATETSLGVVTVRAFNIADRFYQNYLKLVDTDAKLFFHSNVATEWLILRIEVLQNLTLFTAALLLVLLPKGLVSPGLAGLSLSYALSLSECQIFLSTWFCNLSNYIVSVERIKQFIHIPEEPPAIVENRKPPLSWPSKGRIELQNLEIRYRPNAPLVIKGITCTFKEGSRVGIVGRTGSGKSTLVSALFRLVDPARGDILIDGISILPMGLKDLRMKLSVIPQEPTLFRGSIRTNLDPLDLYSDDEIWKALEKCQLKTTVVNLPNQLDSSVSDEGENWSVGQRQLFCLGRVLLKRNRILVLDEATASIDSTTDAILQRVIRQEFARCTVITVAHRVPTVIDSNMIMVLSYGKVVEYDEPSKLMETNSSFSKLVAEYWSSCSKNFSQVPNH 1434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0923 1434 CDD ABC_6TM_ABCC_D1 286 574 IPR044746 GO:0140359
Lele42g0923 1434 FunFam ABC transporter C family member 5 834 1166 - -
Lele42g0923 1434 Pfam ABC transporter transmembrane region 286 551 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele42g0923 1434 Pfam ABC transporter transmembrane region 905 1129 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele42g0923 1434 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1175 1418 IPR027417 -
Lele42g0923 1434 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 285 566 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele42g0923 1434 CDD ABCC_MRP_domain1 605 765 - -
Lele42g0923 1434 FunFam ABC transporter C family member 10 268 582 - -
Lele42g0923 1434 Gene3D - 1168 1419 IPR027417 -
Lele42g0923 1434 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 205 1421 - -
Lele42g0923 1434 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 569 789 IPR003439 GO:0005524
Lele42g0923 1434 Gene3D ABC transporter type 1, transmembrane domain 835 1166 IPR036640 GO:0005524|GO:0016020
Lele42g0923 1434 ProSitePatterns ABC transporters family signature. 691 705 IPR017871 GO:0005524|GO:0016887
Lele42g0923 1434 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1185 1419 IPR003439 GO:0005524
Lele42g0923 1434 Pfam ABC transporter 1203 1350 IPR003439 GO:0005524
Lele42g0923 1434 SMART AAA_5 596 766 IPR003593 -
Lele42g0923 1434 SMART AAA_5 1211 1402 IPR003593 -
Lele42g0923 1434 SUPERFAMILY ABC transporter transmembrane region 856 1167 IPR036640 GO:0005524|GO:0016020
Lele42g0923 1434 SUPERFAMILY ABC transporter transmembrane region 273 580 IPR036640 GO:0005524|GO:0016020
Lele42g0923 1434 CDD ABC_6TM_ABCC_D2 875 1160 IPR044726 GO:0140359
Lele42g0923 1434 Gene3D - 603 806 IPR027417 -
Lele42g0923 1434 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 605 789 IPR027417 -
Lele42g0923 1434 CDD ABCC_MRP_domain2 1183 1403 - -
Lele42g0923 1434 Pfam ABC transporter 605 718 IPR003439 GO:0005524
Lele42g0923 1434 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 875 1148 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele42g0923 1434 FunFam Multidrug resistance-associated protein 4 593 803 - -
Lele42g0923 1434 Gene3D ABC transporter type 1, transmembrane domain 272 583 IPR036640 GO:0005524|GO:0016020
Lele42g0923 1434 FunFam ABC transporter C family member 3 1168 1419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0923 Lele-ChrLele42 21961485 21967671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0923 631 804 Calmodulin-binding Proteins AT2G36910 28.729 1.37e-18 90.5