Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0922 ATGGCAGGAACTGTGGTGATTTTTGATTTTGATTCGACAATAATCGAGTGCGATAGCGATAACTGGGTGCTTGATCATTTTTGTTTAACTGATAAGTTCTATCAACTCCTTCAAAACACGCCTTGGAACCCCCTTATGAATCAGACGATGAAGGAGCTTCATTCACAAGGCAAATCCATGGAAGAAATTGTGCAAGTTTTGAAACGAACTCCAATGCATCCTCACATTGTTCCTGCCATTGAGGCAGCTTATTCTCTTGGATGTGATCTGAGGATTGTTAGTGATGCCAATATCTTCTTTATTGAGACAATTCTGAAGCATCATGGGGTTTGGGATTGTTTCTCAGAGATTATTGCAAACCCCAGCTTTGTTGATGAAGAAGGCAGGCTCAGGATTTTTCCCTACCATGATTATCTTAAATCTTCTCATGGATGCAACCTTTGTCCTCCAAACATGTGCAAGGGAAAGATCATAGAAAGGATTCAGAAGTGTGTTGCAGAAGAAGGGAACAATAAATTCATATATCTTGGAGATGGAAGTGGAGACTTTTGTCCAAGTTTGAAGCTGAAAGACACTGATAGCTTAATGCCGAGGAAGAACTTTGCTTTGTCTGACTTAGTTTCCAAGAACTCCGACAGAATAAAAGCAGAGGCGCATGGTTGGAGCGATGGGGAAGAGCTCAGGCAAGTGCTGCTCCGTATAATCAACACTCATCAACAAGAAGCAAGCAAAAGTAGCGAGGATTCAAGTACTCCAATCAAGGCCGTTGATTGCAAGATGGTGGGCCCCATCACTCCCATTGATGCCCCTAAAAACCTGACTCATCAAGCCATACCAGTTCCTCCATTAACTAGCAGCTGA 861 0.4251 MAGTVVIFDFDSTIIECDSDNWVLDHFCLTDKFYQLLQNTPWNPLMNQTMKELHSQGKSMEEIVQVLKRTPMHPHIVPAIEAAYSLGCDLRIVSDANIFFIETILKHHGVWDCFSEIIANPSFVDEEGRLRIFPYHDYLKSSHGCNLCPPNMCKGKIIERIQKCVAEEGNNKFIYLGDGSGDFCPSLKLKDTDSLMPRKNFALSDLVSKNSDRIKAEAHGWSDGEELRQVLLRIINTHQQEASKSSEDSSTPIKAVDCKMVGPITPIDAPKNLTHQAIPVPPLTSS 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0922 286 Pfam Putative Phosphatase 4 235 IPR016965 GO:0016791
Lele42g0922 286 Gene3D - 2 189 IPR023214 -
Lele42g0922 286 TIGRFAM DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 4 199 IPR006384 GO:0016791
Lele42g0922 286 MobiDBLite consensus disorder prediction 267 286 - -
Lele42g0922 286 SUPERFAMILY HAD-like 4 185 IPR036412 -
Lele42g0922 286 PIRSF PLP_phosphatas_PHOSPHO2 1 239 IPR016965 GO:0016791
Lele42g0922 286 PANTHER PHOSPHATASE, ORPHAN 1, 2 1 242 IPR016965 GO:0016791
Lele42g0922 286 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0922 Lele-ChrLele42 21954674 21955960 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele39g1102 39 19578512 19583599 Lele42g0922 42 21954674 21955960 CCT
Lele42g0922 42 21954674 21955960 Lele44g0435 44 3241874 3243458 hybridization