Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0915 ATGTTGGCCTTTCTTGGAATAGATGATCAAATATGGTGTTCTTGCATTCGTGCTTATATGGATATTCCTATATTTCATGCTTTCAGCACGGATTGGTATAATCTTGAAAAATCAAAGCGAGTAAAACCTTTCCGTTGTGGAGAGTATAATGAATGCATTGAAAGAGCAAAGGCATCTGTGGCGAATGCAAACAAGAAGGCAGTGAAGTATGCTCGCAGAGAAGATGCAATCCTCCATGCTCTTGAACTTGAGAGTGCTCGCGTAGGCAAGGAACCATTAAATTTCTCCAGAGAAGATAAATCAACTGGTGAACATGGTGTTGTAGCTGGAGAATCACTGGTTGCGTCCAATTCTGGTGATGATGATACTGATGATCTCAGTGAATCTGAAGACAATTCTAATTCAGCTCCAGAATTATCTCAATCTGGTATATCTTTTGAAGAGCCAAATCACAATGGTTCTTCCAAGGTGCAATCTGTTCAGGGTAGGAGAAGAAGAACCCCTAATGACTCAGAAGATGATGGGACTGAAGGAGTCAAGAGAATGAGAGGACTTGAGGACCTGGGCACTGGTGTGGTGTCAAAAATAAAGGCCCAGGGTGCAGGAACAACTGATGTAGTTCAGCAGGAAACTGCTTCCCCAAGCAATTCAAACACCAGAAGTTGCTTGGCAAATGGTACTTCTCTACATGGTGGTAAGGTTAATCCATCACTGAAAAGAAAGAGATCACAAGTGGCAAATGTTCATGAATTCCTGAAGAAAAAAAACCGACGCCGACCATTAACAAAGGTTTTGGAGAGTACAGCCATGGTATCAGTTCCTGTCACCTGTGATCAGCTTCCGAATCCAATCAGTTCTCCACCTTGTGGGATATCTGATGGAAAAATTTCAGGATTGGATTCCAATGGGTCAAAGAAAGGTATTCCACCAGCTATTCACAATTCTGACGGTAATGGAGTAGCATGTGAAAATGGAACTGCATTAAATGCTACTGAAATTAGTCAAAGGGTCAAGGAGAATGATACTTCGGGCATGTCAGGGTTAGTTGGGAATGGTTCCTCGGATAAGTTATTTGATGTGCCATTTGTTGGAGATTTGGGAGAGGAGAAACACACTCCAGGCTTTTCACCTGTTATTGTTTCTTGTTCATCTGAAAAGCCTCAAGATGGTGCATTGGGAGGATCTTGTCATGGTGGTCAATCAGAAGCCTTGTTATCAGCTAACGAGGGCCAAAATGATTCTGGTTGTATGACTCTAGCTGCTGGTCATAATAGCATTAGCCATAGTGGTGAGAAAGGTAGTTCAAAGTGGCAGTCAAAAGGAAAGAGGAACTCCAGAAATACAAATAAAAATAGGAAACAGGTCTCAAGAAACTATGCGGATGCGGATGGTGAATCCAATGCTAATTTTTCAAGTATGGAGAACCCAGATGAATTCTCTCAAGGTGCCGGACAGAAAGTTGATTCGAAGACCACAGGTGCACTGACATCCTCATACCTTTGTCCATCCCAGACCAATTGCAAGTCGGTTGGTGAAGGCCAACTAGATGGGTTCCACGGCTTGAGCAAGCATGCCAGGAGTGCAACAGAGGCAAAGCTATTGCCTGATGGATCTCTCACACCTCAGAGATTGCTTCCTTATCGCCAGTCCAGGTTTATGGTTAACTCCAGATATCCTATGGCTGATTTTCCTGGAAGAAATCATTGTGCCGACACTTTGTTATATGACGTTAAGATAGAAGTTAAAGCCAGCTACCGGCCACAACATGTCCCTTTGGTTTCTCTCATGAGTAAACTGAATGGCAAAGCAATTGTTGGACATCCTCTTACAGTTGAGCCCTTGAATGACGGACATTGTGATGAAATGTTGAGGAGCATTGGGGCTGACTTGACCAGTGGTGGCAATTATTATGCATTTAAACCGAACTCAGCTGGTGGAAGACTTGCTAGCAAGAATTTGCCACGTGTTTCATCGAGTAAATCTTCCAGAACAAAGAAATCCGGGCTGTTGAATAAAAAGATCCGAAAACTGTCATCACTTACAGGTCACAGGCAATCAGAAGAGGAGAGAAAACCAGTGGTAGATAAGTTCAAAGGTCCTGTCATAGCTTGCATTCCCCTAAAAGTAGTATTTAGTCGGATAAATGAGGCTGTGAACGGTCAAGCTCGGCCAACCCACCGTGAGGTTCACTTGACCCTACTCTGTCTCCGTCGCTCACACCACTCCCTTGAACAAGCGGAAGCCATTAGGAAAAAAAAAAAAGATAAGATGGCCACAGTATCAGGGCAGCTCATATGGGAGATCGTGAAGAAGAACAACTCTTTTTTGGTTAAAGAGTTTGGCAGGGGCACTCAGAGCGTCGAGTTCAGCAAAGAGAGCAATAATCTCTACAATCTCAACTCTTTCAAACACTCTGGTTTGGCAAACAAGAAGACCATCACTATTCAACCTGCAGGTAAAGATCAATCTGTGTTGCTTGCAACTACCAAGACAAAGAAACAGAACAAGCCTGCTTCTTTGCTTCATAAATCTGTCATGAAAAAGGAGTTCCCAAGAATGGCAAAGGCTGTGGTAAACCAGGTGGCAGACAACCACTACAGGCCTGATCTTAAGAAGGCAGCCCTTGCAAGGTTGAGTTCTGTTCATAGGAGCCTCAAAGTCTCCAAGTCTGGTGTTAAGAAGAGGAACAGACAGGCTGCCAAGGTTCCTGGCAGAAAGTAA 2721 0.4359 MLAFLGIDDQIWCSCIRAYMDIPIFHAFSTDWYNLEKSKRVKPFRCGEYNECIERAKASVANANKKAVKYARREDAILHALELESARVGKEPLNFSREDKSTGEHGVVAGESLVASNSGDDDTDDLSESEDNSNSAPELSQSGISFEEPNHNGSSKVQSVQGRRRRTPNDSEDDGTEGVKRMRGLEDLGTGVVSKIKAQGAGTTDVVQQETASPSNSNTRSCLANGTSLHGGKVNPSLKRKRSQVANVHEFLKKKNRRRPLTKVLESTAMVSVPVTCDQLPNPISSPPCGISDGKISGLDSNGSKKGIPPAIHNSDGNGVACENGTALNATEISQRVKENDTSGMSGLVGNGSSDKLFDVPFVGDLGEEKHTPGFSPVIVSCSSEKPQDGALGGSCHGGQSEALLSANEGQNDSGCMTLAAGHNSISHSGEKGSSKWQSKGKRNSRNTNKNRKQVSRNYADADGESNANFSSMENPDEFSQGAGQKVDSKTTGALTSSYLCPSQTNCKSVGEGQLDGFHGLSKHARSATEAKLLPDGSLTPQRLLPYRQSRFMVNSRYPMADFPGRNHCADTLLYDVKIEVKASYRPQHVPLVSLMSKLNGKAIVGHPLTVEPLNDGHCDEMLRSIGADLTSGGNYYAFKPNSAGGRLASKNLPRVSSSKSSRTKKSGLLNKKIRKLSSLTGHRQSEEERKPVVDKFKGPVIACIPLKVVFSRINEAVNGQARPTHREVHLTLLCLRRSHHSLEQAEAIRKKKKDKMATVSGQLIWEIVKKNNSFLVKEFGRGTQSVEFSKESNNLYNLNSFKHSGLANKKTITIQPAGKDQSVLLATTKTKKQNKPASLLHKSVMKKEFPRMAKAVVNQVADNHYRPDLKKAALARLSSVHRSLKVSKSGVKKRNRQAAKVPGRK 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0915 906 MobiDBLite consensus disorder prediction 201 232 - -
Lele42g0915 906 MobiDBLite consensus disorder prediction 415 442 - -
Lele42g0915 906 MobiDBLite consensus disorder prediction 200 236 - -
Lele42g0915 906 MobiDBLite consensus disorder prediction 415 488 - -
Lele42g0915 906 MobiDBLite consensus disorder prediction 886 906 - -
Lele42g0915 906 Pfam Ribosomal L28e protein family 764 884 IPR029004 -
Lele42g0915 906 MobiDBLite consensus disorder prediction 887 906 - -
Lele42g0915 906 MobiDBLite consensus disorder prediction 648 668 - -
Lele42g0915 906 MobiDBLite consensus disorder prediction 94 186 - -
Lele42g0915 906 MobiDBLite consensus disorder prediction 163 184 - -
Lele42g0915 906 MobiDBLite consensus disorder prediction 451 488 - -
Lele42g0915 906 MobiDBLite consensus disorder prediction 132 162 - -
Lele42g0915 906 Gene3D - 761 888 - -
Lele42g0915 906 PANTHER T17B22.17 PROTEIN-RELATED 29 727 IPR044679 -
Lele42g0915 906 FunFam 60S ribosomal protein L28 761 889 - -
Lele42g0915 906 Coils Coil 53 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0915 Lele-ChrLele42 21883877 21897070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0915 757 899 Cytoplasmic Ribosomal Protein Gene Family AT2G19730 73.427 3.91e-68 221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele42g0915 42 21883877 21897070 Lele43g0452 43 3970114 3974005 hybridization
Lele42g0915 42 21883877 21897070 Lele44g0442 44 3315561 3317656 hybridization