Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0912 ATGGGCAACACAGAGAAGTTGATGAACCAGATCATGGAATTGAAATTCACCTCAAAGTCCCTTCAACGCCAATCCCGTAAATGCGAGAAGGAAGAGAAATCTGAGAAGCTTAAGGTCAAGAAAGCCATGGAGAAAGGCAACATGGACGGCGCTCGTATCTACGCCGAGAACGCCATCCGAAAGCGAAACGAGCAGATGAACTATCTGCGCCTCTCCTCTCGGCTTGACGCCGTCGTGGCTCGGCTTGATACCCAAGCCAAGATGAGCACCATCAACAAGTCCATGGCTAATATCGTCAAGTCTCTGGGATCTTCCTTGAACACCGGGAATCTCCAGAAGATGTCGGAGACCATGGACTCTTTCGAGAAGCAGTTTGTGAATATGGAGGTTCAAGCTGGGTTCATGGAGAGCTCCATGGCTGGATCCACCTCGCTTTCCACTCCTGAAGGAGAAGTCAACAGCTTGATGCAGCAGGTCGCCGATGATTATGGCCTCGAGGTCTCGGTGGGCCTGCCGCAGCCGGCATCTCACGCGGTGCCGACTAAGGAGACGGAGAAGCAGGACGAGGATGACTTGACTAGGCGACTTGGTGAGCTTAAGGCCAGAGGTTAA 612 0.5261 MGNTEKLMNQIMELKFTSKSLQRQSRKCEKEEKSEKLKVKKAMEKGNMDGARIYAENAIRKRNEQMNYLRLSSRLDAVVARLDTQAKMSTINKSMANIVKSLGSSLNTGNLQKMSETMDSFEKQFVNMEVQAGFMESSMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPASHAVPTKETEKQDEDDLTRRLGELKARG 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0912 203 Coils Coil 182 202 - -
Lele42g0912 203 Gene3D - 3 173 - -
Lele42g0912 203 Coils Coil 111 131 - -
Lele42g0912 203 Pfam Snf7 11 176 IPR005024 GO:0007034
Lele42g0912 203 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 13 200 IPR005024 GO:0007034
Lele42g0912 203 MobiDBLite consensus disorder prediction 171 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0912 Lele-ChrLele42 21868968 21869579 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele42g0912 42 21868968 21869579 Lele37g0341 37 2851341 2852666 CCT
Lele42g0912 42 21868968 21869579 Lele38g0322 38 2539060 2540382 CCT
Lele42g0912 42 21868968 21869579 Lele39g1083 39 19427918 19429222 CCT
Lele42g0912 42 21868968 21869579 Lele40g0301 40 2427074 2428399 CCT
Lele42g0912 42 21868968 21869579 Lele43g0456 43 3999289 3999903 hybridization
Lele42g0912 42 21868968 21869579 Lele44g0447 44 3345308 3345739 hybridization