Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0907 ATGACACGCTCTTCTCTGGGAACGTCTAGTCGAGATAATACTTTCACCAGATACGCAGATGATACCTACGGTAGGTCATGGTTCCTCCATAGAGAGACTGGAAACTCAGTCCCAATCAACACAGCAGTTGCAATTGATGGTGATGAATCAGGCTATAAATTACCAAAAGAAGTGTTGGGCACTGCAATTCGATCACAGAACCGTTCGTCTCCCTTAGTTATCTACTTGGGGGATTACGATACAGATTACGAGTACCATGTTTACCTTCATTTTTATGACTTCGACGAGGAGCATTCTGATCAATATGAGCAAAGAGAGATGCAAGTTACTTTCACGGAATCGATCCAGGAGAACATAACTCTCAAATACCGGGTGCCCAAAACCATAGTTAAGACAATTCCTAAAGTGACGACTTCTTCGTTTAAAAAAGACGGGAATCTAAAAGCAAAAAATCGTTCGTTTGATCACTTAGAAGTTCTTAGTATTACCAACAACTTTGAAACCGTAATTGGACAAGGGGGATTTGGAAAAGTGTACCTTGGTACACTACAAGATGATACACAAGTTGCAGTCAAGTTACTCTCAGGGTCATCACAACAAGGGTTTAAGGAATTTCAGTCAGAGGCAGAACTTTTGATGGTTGTTCACCATAGGAACTTGGTTTCTCTTGTTGGTTATTGTAACGATGGTGACATGAAAGCACTAGTTTATGAATACATGACTGAAGGAAATCTCCGACAAAAATTATCAGATAAGAACCCATGTGCTTTGAAATGGAATGAGAGACTTCAGATAGCATTGGATGCAGCATGTGGTGATTAA 822 0.4027 MTRSSLGTSSRDNTFTRYADDTYGRSWFLHRETGNSVPINTAVAIDGDESGYKLPKEVLGTAIRSQNRSSPLVIYLGDYDTDYEYHVYLHFYDFDEEHSDQYEQREMQVTFTESIQENITLKYRVPKTIVKTIPKVTTSSFKKDGNLKAKNRSFDHLEVLSITNNFETVIGQGGFGKVYLGTLQDDTQVAVKLLSGSSQQGFKEFQSEAELLMVVHHRNLVSLVGYCNDGDMKALVYEYMTEGNLRQKLSDKNPCALKWNERLQIALDAACGD 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0907 273 ProSiteProfiles Protein kinase domain profile. 164 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0907 273 SUPERFAMILY Protein kinase-like (PK-like) 151 272 IPR011009 -
Lele42g0907 273 FunFam Leucine-rich repeat receptor-like protein kinase 142 239 - -
Lele42g0907 273 Pfam Protein tyrosine and serine/threonine kinase 166 272 IPR001245 GO:0004672|GO:0006468
Lele42g0907 273 Pfam Malectin-like domain 3 136 IPR024788 -
Lele42g0907 273 ProSitePatterns Protein kinases ATP-binding region signature. 170 192 IPR017441 GO:0005524
Lele42g0907 273 PANTHER OS07G0107800 PROTEIN-RELATED 3 127 - -
Lele42g0907 273 Gene3D Transferase(Phosphotransferase) domain 1 138 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0907 Lele-ChrLele42 21817468 21822727 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0907 137 272 Receptor kinase-like Gene Family AT1G51890 55.634 1.02e-42 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele42g0907 Malectin_like 2.7e-18 CL0202