Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0905 ATGAAGAGCACGCCACCGTGGATTCAAGCTTGCTTTGTGTTTGTTTCATTCATAATTGTTACCCACTCAGTACAAGTTTTTGCAGATGACTATTATGACAGTGATTCGGAGGGGGCCATAAGCATCGATTGTGGCTTGGGTATGGTTGAAGACTCTGTTTTCATCAGATACCGTGATGATATCTACGGGAGGTCCTGGTTCAATAATAAAGCTACTGACAACTCAGTGCCAATCAATATATCATCAGAAGCTATTGAGGATGATGATTCCAATGATGAGTTCAAACTACCAAAGCAAGTGTTGAGCACTGCAATCCAATCATCACTAAATTCTTCCTCTTCCTTGAATATCGATTGGGACTATAGTACGGGTTATGAATATTATGTTTACCTTCACTTTTATGACTTCGTGGAGCATTCTCAAAATCAGAAAAGAAGTATGGAAATTGCTTTCACTGATACAATCCTCCGAGAATCTGTAACTCTTGAATACCAGCAACTCCAAACCAAGTTTTATACAATTCCAGAAGGAGTATCTCCTACTAATATTACGTTGACATCCTCGCCCGGTTCTGGTTTGCCTCCCATGATCAATGCTTATGAGATCTATAGAGTACTACGAGAACCCAGTTTACCAACTCATAACGATGATGTTGTTGCTATGAGGAGAATCAAGCACGGTTATAATATCCAGAGAATCAGTTGGCAAGGAGATCCCTGCATGCCAAAAGATTACATATGGGAAGGTGTAACTTGCAATTACTATGAGAACTTTCCAAGGGTCATTTCATTGAAGATGAGCTCAAGCAAATTAGAAGGAGAGATGGTTACTGATTTCTCCAAACTCGAGATGTTGGAGTCATTGGATTTGTCAAACAATCAACTGACTGGAGAAATACCAGAATCTTTAGCGAAACTAGCCAATTTGAGAGTACTTAATTTGACAGGAAATAATCTCATAGGTTCAGTTCCTGAGGCTCTGACTCTTAAGGAGAAATCTGGTTTGACATTGAGTTTGGATGGAAATCCAGATCTATGTCAAAAAGCAGGCTCTTGCAAAACCAAAAAGTTCATCGGACCACTTGTTGCCTCATCATTAGCTTCTATGGCAGTACTTGTACTAATAGTTTACATTCCTATGATGCTCTACAAACGTAAAAGAAAACAGCAAAAAAATGGTACGGAAGCTCCCCAAGTGATGCTGTGTAAGAAAGGAGGTGATCTTAAATCAAAATATCAAGAATTTTGTGAGGATGAAGTTCTTAGTATTACCAATAATCTTGAATCAGTAATTGGAGAAGGAGGATTTGGAAAAGTGTACCTAGGAAAATTACAAGATGGGACACAAGTTGCAGTAAAATTACTTTCTAAGTCATCAAAACAAGGATATGATGAGTTTGAATCAGAGGTAAAACTATTATCCGTGGTTTACCATAAAAACTTACTCTCTCTTGTTGGTTACTGTGACGATGGTGACATGAGAGCATTGATTTATGAATACATGGCAAAGGGAAATCTCCATCACCAATTATCAGGTAAAACCTCTTACGTTTTAAATTGGAATGAGAGACTTCAAATCGCATTAGATACAGCGTGTGGATTGAACTATTTACATAATGGGTGCAACCCACCAATAATTCATAGAGACCTAAAATCATCTAACATCTTGCTAAGTGAAAATATGCATGCCAAGATTGCTGATTTCGGACTATGTAAAGCTTTTGCAAGTGACAATGACACTCATATTTCAACTCGTCCCGCTGGCACATTTGGTTACCTCGACCCTGAATTTTATAGATCTGGAAACTTGCACAAATACAGTGATGTTTATAGTTTTGGGATAATTCTACTCGAGCTGATGACGGGTCGATCAGCAATTATGAGAACACCTGAAGGCGCAAGTCATATCGTTGATTGGATGACTCCAAAGTTTGATATGGGAGATATAGAATCCATTATGGATCCAAAGTTAGAGGGAAACTTCAACATTGCAACAGCAAGAAAGGTTTTAGAGATAGCCATGTGCTGCATTAAACCAATTGGTGCGAAAAGACCAGATATAAGTGATGTCGAGAATGATCTAAAGCAGTGTTTGGCGCTGGACACATTGTTCATTGAAAGTGCAGAAAGCAGCGGTTTATTCTCAAGCACCACATTTGATTCAAGTTTTTATCATTGTGGATCCCACTCACCGCCATCTGTTAGATAA 2208 0.3863 MKSTPPWIQACFVFVSFIIVTHSVQVFADDYYDSDSEGAISIDCGLGMVEDSVFIRYRDDIYGRSWFNNKATDNSVPINISSEAIEDDDSNDEFKLPKQVLSTAIQSSLNSSSSLNIDWDYSTGYEYYVYLHFYDFVEHSQNQKRSMEIAFTDTILRESVTLEYQQLQTKFYTIPEGVSPTNITLTSSPGSGLPPMINAYEIYRVLREPSLPTHNDDVVAMRRIKHGYNIQRISWQGDPCMPKDYIWEGVTCNYYENFPRVISLKMSSSKLEGEMVTDFSKLEMLESLDLSNNQLTGEIPESLAKLANLRVLNLTGNNLIGSVPEALTLKEKSGLTLSLDGNPDLCQKAGSCKTKKFIGPLVASSLASMAVLVLIVYIPMMLYKRKRKQQKNGTEAPQVMLCKKGGDLKSKYQEFCEDEVLSITNNLESVIGEGGFGKVYLGKLQDGTQVAVKLLSKSSKQGYDEFESEVKLLSVVYHKNLLSLVGYCDDGDMRALIYEYMAKGNLHHQLSGKTSYVLNWNERLQIALDTACGLNYLHNGCNPPIIHRDLKSSNILLSENMHAKIADFGLCKAFASDNDTHISTRPAGTFGYLDPEFYRSGNLHKYSDVYSFGIILLELMTGRSAIMRTPEGASHIVDWMTPKFDMGDIESIMDPKLEGNFNIATARKVLEIAMCCIKPIGAKRPDISDVENDLKQCLALDTLFIESAESSGLFSSTTFDSSFYHCGSHSPPSVR 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0905 735 PRINTS Leucine-rich repeat signature 306 319 - -
Lele42g0905 735 PRINTS Leucine-rich repeat signature 285 298 - -
Lele42g0905 735 Gene3D Ribonuclease Inhibitor 220 346 IPR032675 -
Lele42g0905 735 Pfam Malectin-like domain 51 205 IPR024788 -
Lele42g0905 735 SUPERFAMILY L domain-like 243 328 - -
Lele42g0905 735 FunFam receptor-like protein kinase FERONIA 387 500 - -
Lele42g0905 735 Pfam Protein tyrosine and serine/threonine kinase 427 691 IPR001245 GO:0004672|GO:0006468
Lele42g0905 735 ProSiteProfiles Leucine-rich repeat profile. 308 330 IPR001611 GO:0005515
Lele42g0905 735 CDD STKc_IRAK 431 696 - -
Lele42g0905 735 Gene3D Phosphorylase Kinase; domain 1 431 501 - -
Lele42g0905 735 ProSiteProfiles Leucine-rich repeat profile. 284 307 IPR001611 GO:0005515
Lele42g0905 735 PANTHER OS07G0107800 PROTEIN-RELATED 8 703 - -
Lele42g0905 735 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 501 700 - -
Lele42g0905 735 Pfam Leucine Rich repeats (2 copies) 284 324 IPR025875 -
Lele42g0905 735 SUPERFAMILY Protein kinase-like (PK-like) 415 694 IPR011009 -
Lele42g0905 735 SMART serkin_6 425 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0905 735 FunFam Leucine-rich repeat receptor-like kinase 216 348 - -
Lele42g0905 735 ProSitePatterns Protein kinases ATP-binding region signature. 431 453 IPR017441 GO:0005524
Lele42g0905 735 ProSitePatterns Serine/Threonine protein kinases active-site signature. 545 557 IPR008271 GO:0004672|GO:0006468
Lele42g0905 735 ProSiteProfiles Protein kinase domain profile. 425 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0905 735 Gene3D Transferase(Phosphotransferase) domain 1 502 708 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0905 Lele-ChrLele42 21793112 21799812 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0905 55 698 Receptor kinase-like Gene Family AT2G28970 42.727 2.44e-174 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele42g0905 PK_Tyr_Ser-Thr 7.1e-47 CL0016