Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0892 ATGGCAACAGCAACATATCCGCCGCCGCCGCCCTATTACAGACTCTACAAAGATTATTTACAAGACCCTAAATCAGCTCCAGAACCTCCCCCTCCCATAGAAGGGACTTATGTTTGTTTTGGAGGCAATTACACTACTGATGACACTCTACCAAGTTTGGAAGAGCAGGGAGTGCGCCAACTCTATCCTAAGGGCCCTAATGTTGATCATAAGAAGGAGCTGAGATCACTTAACGGAGACTTGCAGCTTCACATTTTGGAGTTTGCTGATATTCTCATTGAGAGACCATCACAATATGCAAGGAGAGTAGAAGAAATATCTCTCGTATTCAAGAACTTGCATCACCTTCTAAATTCACTGCGCCCCCATCAGGCAAGAGCTACATTGATTCACATTTTAGAACTTCAAATACAGCGTCGTAAACAAGCAGTGGAGGAAATAAAGAGGTATATATGTTCTATAAGTTTTTAA 471 0.4225 MATATYPPPPPYYRLYKDYLQDPKSAPEPPPPIEGTYVCFGGNYTTDDTLPSLEEQGVRQLYPKGPNVDHKKELRSLNGDLQLHILEFADILIERPSQYARRVEEISLVFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEEIKRYICSISF 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0892 156 Pfam MED7 protein 4 151 IPR009244 GO:0003712|GO:0006357|GO:0016592
Lele42g0892 156 Gene3D - 62 155 IPR044888 -
Lele42g0892 156 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 7 2 151 IPR009244 GO:0003712|GO:0006357|GO:0016592
Lele42g0892 156 SUPERFAMILY Mediator hinge subcomplex-like 66 151 IPR037212 GO:0016592
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0892 Lele-ChrLele42 21683455 21684989 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED7 Lele42g0892 Med7 2.9e-41 No_clan