Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0882 ATGGCATCATCCCATTTGAGCCTTCTCTGTACTCTCACTGCCATCTTGCTGGTTTCCTCCATGAATTCTTCAGTAGAATCTGCAACACAATTCAAAGTCGGTGACGCCTTCGGTTGGCAACAACCTCCCCCTAACAAGACTGCATTTTACACTCAGTGGGCTGCAACGAACAGATTCCATGTTTCAGATTCTCTGGTTTTTGAGTATAAGAATGACTCAGTTGTGAGTGTGGACAAATGGGATTATTATCACTGTGACGCGAGTGATCCAATCACTATCTTCAACAATGGGAACAGCACTATCAATCTGGAGCAGCCTGGTTCATTCTACTTCATCAGTGGGATTTATGAACATTGCATGAATGGCCAGAAATTGATGCTTCAAGTCATTTCTCCAATGTCTGCTTCTGCTCCTTCACCTTCTTCTCATCTTCATCATCATAGCTCTGCGTCTTCATCATCATCATCACTTTCAGTGGCTCTCATCACCACTTGTTTTTCCTTCATGTTGTTCATTAATGCTTTAGGTGTTTCTTCCGTCTAG 543 0.4291 MASSHLSLLCTLTAILLVSSMNSSVESATQFKVGDAFGWQQPPPNKTAFYTQWAATNRFHVSDSLVFEYKNDSVVSVDKWDYYHCDASDPITIFNNGNSTINLEQPGSFYFISGIYEHCMNGQKLMLQVISPMSASAPSPSSHLHHHSSASSSSSSLSVALITTCFSFMLFINALGVSSV 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0882 180 SUPERFAMILY Cupredoxins 28 130 IPR008972 -
Lele42g0882 180 FunFam Early nodulin-like protein 1 28 134 - -
Lele42g0882 180 Gene3D - 27 134 IPR008972 -
Lele42g0882 180 CDD OsENODL1_like 29 130 IPR041846 -
Lele42g0882 180 PANTHER BLUE COPPER PROTEIN 27 145 IPR039391 GO:0009055
Lele42g0882 180 Pfam Plastocyanin-like domain 47 123 IPR003245 GO:0009055
Lele42g0882 180 ProSiteProfiles Phytocyanin domain profile. 29 131 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0882 Lele-ChrLele42 21575861 21576506 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0882 10 158 Phytocyanin Superfamily AT1G79800 46.405 7.41e-47 150
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele42g0882 42 21575861 21576506 Lele43g0507 43 4611157 4611805 hybridization
Lele42g0882 42 21575861 21576506 Lele44g0474 44 3632629 3633277 hybridization