Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0856 ATGCCTGTGCCTTTCTGGAAGGGGAAGGGAACAGGAAGCTTTGGTAAGAGGAGGAATAAGACCCACACTCTCTGTGTGAGGTGTGGCCGTCGCAGCTTTCACCTCCAGAAGAGTCGCTGTTCGGCATGTGCTTACCCTGCTGCCCGCAAGAGGAAATATAACTGGAGTGTCAAGGCTATCCGCCGAAAGACAACCGGAACTGGTAGGATGAGGTACTTGCGTAATGTGCCTCGCAGGTTCAAGAGCGGTTTCAGAGAGGGTACTGAAGCCGCACCCAGGAAGAAGGGAGCAGCCGCTACAGCTTAA 306 0.5425 MPVPFWKGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRKKGAAATA 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0856 101 SUPERFAMILY Zn-binding ribosomal proteins 8 61 IPR011332 GO:0006412
Lele42g0856 101 FunFam Ribosomal protein L37 7 94 - -
Lele42g0856 101 Pfam Ribosomal protein L37e 9 59 IPR001569 GO:0003735|GO:0005840|GO:0006412
Lele42g0856 101 ProSitePatterns Ribosomal protein L37e signature. 10 29 IPR018267 GO:0003735|GO:0005840|GO:0006412
Lele42g0856 101 PANTHER 60S RIBOSOMAL PROTEIN L37 8 100 - -
Lele42g0856 101 Gene3D - 8 93 IPR011331 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0856 Lele-ChrLele42 21400260 21400920 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0856 9 101 Cytoplasmic Ribosomal Protein Gene Family AT1G52300 90.323 3.17e-58 172