Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0854 ATGAACGAAGGAGGGAGGCAGGGACAGAGATCTGGTGCGAAGGGGGTGCACCACCAGGGCCAGTACTCGGACAACTTTCTGGACAGCTCATCTAATGGGAGGTGGCTCCAGTCAGCTGGTCTTCAACACCTTCAATCTTCGGGCAATTCCATTCCTCCACTTCAGGACTATAACTTCTATGGTGGAGGAGGGCAGGGGGCTAGAATGTTCAGGAATCCGCAAAGGAGCTTTAATGGGGCGAATGACTATTACACAGAACCGTGCACACCGCGTGATGATCCTGGTAATCACCGGTCTTCAAATCACAGGAAGAATGGTGAAGATTCACCTGGTGATTTCAGCCCTGGCCTTTTGGATCTGCATTCGTTTGATACAGAGCTTCTTCCTGAGATGCCAGTTACCAATGTGTATGAGAGTAATTCCATGTATCATCCTGTTCGGGGTAGAAGCTTTGATGACTCTGAACCTTACATTTCAAACAAACAGACTGGTAGAGCTCGTGCTCCAGAAAACAACCTCCTCAAAAGTTTTTCTGCAGACAAAGAGAAATCTAGTTCTGTAGCAAAGATTAAAGTTGTGGTGCGCAAAAGACCATTGAATAAGAAGGAGCTAACAAAGAATGAGGAAGATATTATAGACACACACTCCAATTCTCTAACGGTACATGAAACTAAACTTAAGGTTGACTTAACTCAATATGTAGAAAAACACGAATTTGTTTTTGATGCTGTCTTGAATGAAGAGGTTACGAATGATGAGGTATATTGTGAAACAGTGGAGCCCATAGTTCCAATAATCTTTCAACGCACAAAGGCAACTTGCTTTGCTTATGGCCAAACAGGTAGTGGAAAAACTTACACAATGAAGCCACTTCCGCTTAAGGCATCAAGGGACATCTTGAGATTGATGCACCATACTTACAGGAACCAGGGATTTCAGTTGTTTGTGAGTTTCTTTGAAATATATGGTGGGAAGCTTTTTGACCTCCTTAATGATCGAAATAAACTTTGCATGAGGGAGGATGGTAAGCAGCAAGTTTGCATTGTGGGTTTGCAAGAGTACAGAGTATCAGATGTGGAGACCATCAAGGAGTTGATTGAGAAAGGAAATGCCACACGAAGTACTGGCACCACAGGTGCGAATGAGGAATCTTCTCGATCTCATGCAATACTTCAGCTTGCCATCAAGAGGTTAGTTGATGGTAATACATCCAAGCCTCCACGTGCCGTTGGCAAGCTCTCCTTCATAGATCTTGCTGGAAGTGAACGTGGAGCTGATACCACAGACAATGACAAACAGACAAGAATCGAAGGTGCTGAGATCAATAAGAGCTTACTTGCCTTGAAGGAGTGCATAAGAGCTCTAGATAATGACCAGGGACACATCCCTTTCAGAGGCAGCAAATTGACTGAGGTTTTGAGGGATTCATTTGTTGGCAACTCCCGCACTGTTATGATTTCATGCATATCACCAGGCTCTGGTTCATGTGAACATACGCTTAACACATTGAGATATGCTGACAGGGTGAAAAGCCTGTCAAAAGGGAACAACCCTAAGAAGGAAGTTTTATCTTCAAATTTCAACCCAAAAGAATCAACTACCATGCCTTTATCTGCGGTTACTGCATCAACCTTTGAGGACCGTGCAGCAGATGCATGGCCTGAAGAAAACGAGGATGATGAATTTAGTCCGTCTGAAGAGTACTATGAGCAGGGGAAACCTTGTTGGAAGAAAAATGGGAAGATTGAATCATACAGTACCGCTGAGGACAAGTTAAAGAAACCCAATGGTCAGATCAGATATAAAGACATGCCAAAAGCTGAATCCGCTACACATTCAGATGATGATTTAAATACCCTCCTACAGGAAGAGGAGGACCTTGTAAATACTCACAGGAAACAAGTAGAGGATACCATGAAAATTGTCAGAGAGGAAATGAACCTCTTGGTTGAAGCAGATCAACCAGGCAATCAATTAGATGGTTATGTAACAAGATTAAACGCCATTCTATCTCAGAAGGCTGCTAATATCCTGCATTTACAAAATCGTTTAGCTCACTTCCAGAAACGCTTAAAGGAGCATAATGTTTTGGTTTCCTCTGCTGGTTACTAA 2112 0.4313 MNEGGRQGQRSGAKGVHHQGQYSDNFLDSSSNGRWLQSAGLQHLQSSGNSIPPLQDYNFYGGGGQGARMFRNPQRSFNGANDYYTEPCTPRDDPGNHRSSNHRKNGEDSPGDFSPGLLDLHSFDTELLPEMPVTNVYESNSMYHPVRGRSFDDSEPYISNKQTGRARAPENNLLKSFSADKEKSSSVAKIKVVVRKRPLNKKELTKNEEDIIDTHSNSLTVHETKLKVDLTQYVEKHEFVFDAVLNEEVTNDEVYCETVEPIVPIIFQRTKATCFAYGQTGSGKTYTMKPLPLKASRDILRLMHHTYRNQGFQLFVSFFEIYGGKLFDLLNDRNKLCMREDGKQQVCIVGLQEYRVSDVETIKELIEKGNATRSTGTTGANEESSRSHAILQLAIKRLVDGNTSKPPRAVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPGSGSCEHTLNTLRYADRVKSLSKGNNPKKEVLSSNFNPKESTTMPLSAVTASTFEDRAADAWPEENEDDEFSPSEEYYEQGKPCWKKNGKIESYSTAEDKLKKPNGQIRYKDMPKAESATHSDDDLNTLLQEEEDLVNTHRKQVEDTMKIVREEMNLLVEADQPGNQLDGYVTRLNAILSQKAANILHLQNRLAHFQKRLKEHNVLVSSAGY 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0854 703 SMART kinesin_4 187 518 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele42g0854 703 PANTHER KINESIN-RELATED PROTEIN 6 558 698 - -
Lele42g0854 703 MobiDBLite consensus disorder prediction 1 33 - -
Lele42g0854 703 Gene3D Kinesin motor domain 168 515 IPR036961 -
Lele42g0854 703 MobiDBLite consensus disorder prediction 68 118 - -
Lele42g0854 703 FunFam Kinesin-like protein 170 515 - -
Lele42g0854 703 MobiDBLite consensus disorder prediction 91 109 - -
Lele42g0854 703 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 512 IPR027417 -
Lele42g0854 703 Pfam Kinesin motor domain 195 511 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele42g0854 703 MobiDBLite consensus disorder prediction 14 33 - -
Lele42g0854 703 CDD KISc_KIF2_like 189 510 - -
Lele42g0854 703 ProSiteProfiles Kinesin motor domain profile. 189 512 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele42g0854 703 MobiDBLite consensus disorder prediction 517 534 - -
Lele42g0854 703 PRINTS Kinesin heavy chain signature 378 395 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele42g0854 703 PRINTS Kinesin heavy chain signature 269 290 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele42g0854 703 PRINTS Kinesin heavy chain signature 462 483 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele42g0854 703 PRINTS Kinesin heavy chain signature 412 430 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele42g0854 703 ProSitePatterns Kinesin motor domain signature. 411 422 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lele42g0854 703 MobiDBLite consensus disorder prediction 514 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0854 Lele-ChrLele42 21389062 21394325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0854 189 524 Calmodulin-binding Proteins AT5G65930 34.971 9.22e-45 171