Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0852 ATGGATTTCTGGCCAGAATTTCTTGCGAGCAGCTGGGGAAGAGAGTTCGTCGCCGGAGGATTTGGAGGCATTGCCGGAATAATCTCCGGCTACCCACTCGACACCCTCCGCATCCGTCAACAGAGCTCCAACAAAGGCTCTGCTTTCAGCATTCTCAGACATGTGGTGGCCAAGGAAGGACCATTTGCTCTCTACAGAGGCATGGCCGCTCCTTTAGCCTCTGTCACTTTTCAGAATGCCATGGTATTTCAAATCTACGCGGTTTTCTCAAGAGCATTATGTGACTCATCCGTCTCAGCCGCCGAGCCCCCATCGTACAAGGGCGTCGCTCTCGGAGGATTCACCACCGGAGCCGTACAAAGCCTCCTACTTTCACCGGTAGAACTGGTAAAGATTCGTCTTCAGCTCCAAAACACTGGTAAAGTTACAGAATCTCACAAGGGTCCCTTACAAGTGGCCAAAACCATATGGAAGAAAGAAGGCCTCAAGGGAATTTACAGAGGACTCGGCGTCACCGTGCTCAGAGACGCACCTTCCCATGGCTTCTACTTCTGGACGTACGAATACATGAGAGAACAACTTCACCCAGGTTGCAGAAAAAGTGGGCAAGAAAGCTTGAACACCATGTTAATGGCGGGAGGTTTAGCCGGAGTAGCGAGCTGGGTTTGTTGTTACCCTTTGGATGTTATAAAGACGAGACTTCAAGCTCAAACGCCGTCTTCAGTGAAGTACAGAGGGGTTTTGGATTGTCTGAGAAAGAGTGTGAAAGAGGAAGGTTACAGTGTGTTATGGCGAGGTTTAGGAATAGCTGTTGCAAGAGCATTTGTGGTGAATGGGGCTATTTTCTCTGCTTATGAGATTGCTCTGAGGATTCTGTTCAACAATGGAAGTATTCAACTCGAAGAAGCTATATGTGAAGATGGGTTATGA 930 0.4871 MDFWPEFLASSWGREFVAGGFGGIAGIISGYPLDTLRIRQQSSNKGSAFSILRHVVAKEGPFALYRGMAAPLASVTFQNAMVFQIYAVFSRALCDSSVSAAEPPSYKGVALGGFTTGAVQSLLLSPVELVKIRLQLQNTGKVTESHKGPLQVAKTIWKKEGLKGIYRGLGVTVLRDAPSHGFYFWTYEYMREQLHPGCRKSGQESLNTMLMAGGLAGVASWVCCYPLDVIKTRLQAQTPSSVKYRGVLDCLRKSVKEEGYSVLWRGLGIAVARAFVVNGAIFSAYEIALRILFNNGSIQLEEAICEDGL 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0852 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 13 92 IPR018108 -
Lele42g0852 309 Pfam Mitochondrial carrier protein 11 95 IPR018108 -
Lele42g0852 309 Pfam Mitochondrial carrier protein 208 295 IPR018108 -
Lele42g0852 309 Pfam Mitochondrial carrier protein 111 194 IPR018108 -
Lele42g0852 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 104 193 IPR018108 -
Lele42g0852 309 FunFam Mitochondrial arginine transporter BAC2 11 302 - -
Lele42g0852 309 Gene3D Mitochondrial carrier domain 109 304 IPR023395 -
Lele42g0852 309 Gene3D Mitochondrial carrier domain 3 108 IPR023395 -
Lele42g0852 309 SUPERFAMILY Mitochondrial carrier 12 286 IPR023395 -
Lele42g0852 309 PRINTS Mitochondrial carrier protein signature 213 235 IPR002067 GO:0055085
Lele42g0852 309 PRINTS Mitochondrial carrier protein signature 119 137 IPR002067 GO:0055085
Lele42g0852 309 PRINTS Mitochondrial carrier protein signature 166 184 IPR002067 GO:0055085
Lele42g0852 309 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085
Lele42g0852 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 204 291 IPR018108 -
Lele42g0852 309 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 10 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0852 Lele-ChrLele42 21382715 21385874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0852 16 99 Antiporters AT1G79900 34.483 4.09e-06 45.8