Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0845 ATGTCCTTCTCTGTGTATATAAAACCACCACAATCCAATGCTGAATCATCAATTGAACCTCCTCGTCAAGCTCGTCAAGTGCCATCAATCATGCCGAAGAAGCTTCAGAAATCTCTCCATGGCTACATCTCCAAGCTCAGACGAAACCCTAATCCCCAAATCAATTTCTCTTCTTCCAGAAATTGGATCTTCTCTGCCTGTAAGCACCCTAAAACCTTGTCTGTTGACGTTGATCATCACCACAGAAATGAAGCTCATCAAGCTCAACGCAACAACAATAATAACGATTCTGCTTCTTTATCCGATGTTGACCGTTTTCTGTTCGAGAATTTCAAGTCCCTATATGTCAGAGAAGATGACGACGAAGAAACGGATAGAAATAATGCAGAATCTAAACAACAGATTGAAGCTCATCAGAAATTAGAGCCAATTTTGTTTGAGTCGCCGCGCCTCGACCTTGGCCTACCGCCGGATCTTCGTGGCTCCAACCGGTTCTTCGTGACGCCCGGTTTGTCTGGTTCTCTGGTCGAGGATGCCGCGAGGTTGAGCGTGACAACGACATGTGACGGCGACGGCGACGAAGCAGGTTCAAGCTCAAGCTCGCCCACAACCGTCAATGGTTATCCGAATATATCTTATAATCATCGTGAAAGTGAGGCCGTGGAGACGCTTCCTCCAGACTTCATCGCCGTCTTGATGTACTCGCCGAAGCCGTACGACGATTTCCGGCGGTCCATGCAGGATATGGTGGAAGCGAGGTTGAATAATCACGAAAGGGTGGATTGGGATTTCATGGAAGAGCTTTTGTTTTGTTATCTTAACCTGAACGAGAAGAAATCGCATAAGTTCATACTCAGTGCTTTTGTGGATGTCATTGCCGGTTTGCGTCGGAGATCGGAGACAGTGCCAGTGACACTGCCGCGAAGTGTTCGAACGGTGAGGATCCGTAGGGCGTCACGAAGAAGATGA 969 0.4757 MSFSVYIKPPQSNAESSIEPPRQARQVPSIMPKKLQKSLHGYISKLRRNPNPQINFSSSRNWIFSACKHPKTLSVDVDHHHRNEAHQAQRNNNNNDSASLSDVDRFLFENFKSLYVREDDDEETDRNNAESKQQIEAHQKLEPILFESPRLDLGLPPDLRGSNRFFVTPGLSGSLVEDAARLSVTTTCDGDGDEAGSSSSSPTTVNGYPNISYNHRESEAVETLPPDFIAVLMYSPKPYDDFRRSMQDMVEARLNNHERVDWDFMEELLFCYLNLNEKKSHKFILSAFVDVIAGLRRRSETVPVTLPRSVRTVRIRRASRRR 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0845 322 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 99 295 IPR038933 GO:0045892
Lele42g0845 322 MobiDBLite consensus disorder prediction 118 141 - -
Lele42g0845 322 MobiDBLite consensus disorder prediction 1 28 - -
Lele42g0845 322 MobiDBLite consensus disorder prediction 1 23 - -
Lele42g0845 322 ProSiteProfiles OVATE domain profile. 231 294 IPR006458 -
Lele42g0845 322 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 229 296 IPR006458 -
Lele42g0845 322 MobiDBLite consensus disorder prediction 118 137 - -
Lele42g0845 322 MobiDBLite consensus disorder prediction 190 210 - -
Lele42g0845 322 Pfam Transcriptional repressor, ovate 235 295 IPR006458 -
Lele42g0845 322 MobiDBLite consensus disorder prediction 186 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0845 Lele-ChrLele42 21332383 21333351 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lele42g0845 Ovate 5.7e-23 No_clan