Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0839 ATGGCTGATTTTTCTTCGGATTCCTCTTTCCATTGTGATATCCTAAGCCTTAAACACATAAGCAACTCATTTTTCCACTTTTCTGGTTCTAAGGTGGGGTTATGTGCTAAAGGATTATCAGATTCTGAGTCTGCATGGAGCCCCACTTCGCCCCTCGATTTCAGATTCTTTTTAAATCTTAGCAGCCCATTTAGTGCTAAGTCTCCTAAACCATATTCCCAAAGTAGACAAAAGAAGCATTTTGAATGCTGTAAAATAGGCCTTGGTATCATAAATACACTTGCTGAAGAAAACAAGCCAGACAGTGAAATCCTGGAAATAGCTCAAAGGAAGAATATAGTTTTTGGACCACAGGTGAAGCCTGGCATTCATAAAACATCAAAGAATTGCTATGAACCATTTCCCCCTTGTGTGAGATCTAATTCTTTGCCAAAGAACTATGTTATTTCTGATAAGAAAAATTCCAAATTTGAACCTGAAAGCTCCAATCATGTCCCCAGAAATAGAGAGTTCCCTCAGGAATCTGAAGCTTTCAAGAATGTTATGATGTCTTTGCCAGTTGCCACTAAGCCTTCCTCATCATCAATAGACTCGAATCAAATTTTCAATTCAGGAATTGATAAATTTTGTTTAGAAAATTCATCTTCAGGAAAGAGTTTAGCTCCTGTAACTGGCCCAATTTCACAGTTAGATTGCCTTTCAAATATCAAACCAAGTTCACTTCCCATATCCATTGATTTTAGTAATGGATATTTTGGCTCGCTTTCAGCAAGAGAGATAGAGCTTTCTGAGGATTATACTTGTATTATTTCTCATGGTCCAAACCCTAAGCGAACACATATTTTTGGTGACTGTATTTTGGAATGTCACAATACTGACTCAACCCAGTTCAGCCAGAAGGAAGAACCTGAGATGAGATTCTTTAAGGTTTCTACATTATCAGAAGAATCAGCAAACCCTTATCCCTCTGACAATGTTTTGAGCTTTTGTTACTCATGCAAAAAGAAATTGGAAGAAGGGAAGGATGTTTACATCTACAGGGGTGAAAAAGCGTTTTGCAGTTTTGATTGTCGCTCTGAGGAGATTTTAGCTGAGGAGCAAAGCGAAAATAACTCGGCAGAGAATTGGCCTGATTCGAGCTACCATGATGTCTTCCTCATGAATCTGCCTATGGCCAAATAA 1182 0.3832 MADFSSDSSFHCDILSLKHISNSFFHFSGSKVGLCAKGLSDSESAWSPTSPLDFRFFLNLSSPFSAKSPKPYSQSRQKKHFECCKIGLGIINTLAEENKPDSEILEIAQRKNIVFGPQVKPGIHKTSKNCYEPFPPCVRSNSLPKNYVISDKKNSKFEPESSNHVPRNREFPQESEAFKNVMMSLPVATKPSSSSIDSNQIFNSGIDKFCLENSSSGKSLAPVTGPISQLDCLSNIKPSSLPISIDFSNGYFGSLSAREIELSEDYTCIISHGPNPKRTHIFGDCILECHNTDSTQFSQKEEPEMRFFKVSTLSEESANPYPSDNVLSFCYSCKKKLEEGKDVYIYRGEKAFCSFDCRSEEILAEEQSENNSAENWPDSSYHDVFLMNLPMAK 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0839 393 ProSiteProfiles Zinc finger FLZ-type profile. 325 369 IPR007650 -
Lele42g0839 393 Pfam zinc-finger of the FCS-type, C2-C2 317 367 IPR007650 -
Lele42g0839 393 PANTHER FCS-LIKE ZINC FINGER 11 1 392 IPR044585 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0839 Lele-ChrLele42 21285461 21287176 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele42g0839 42 21285461 21287176 Lele44g0507 44 3894414 3896126 hybridization