Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0836 ATGGGTCTCAACTCAAACCGGGTGGAGCACTTCGATTCTCACAACCCAACTGTTGTCAAAATCCAAACAGATATTCCTTCCGTGGAAATCCACCCGGTTTGCCTTCCTCCTGAGCAAACCACTCTCCAGAAGCTCAAGCGCAGGCTCTCTGAGATCTTCTTCCCCGATGACCCTCTTCATGGCTTCAAGAACCAAACCCGTTTCGACAAGCTCATTATGGCTCTTCAGTATCTCTTCCCCATTTTCCAGTGGGCCCCTCACTATTCTCTCAAACTCCTCCGTTCTGATATCATCTCCGGCCTCACCATTGCCAGCCTCGCCATTCCTCAGGGAATAAGCTATGCAAAGCTTGCGGATTTGCCACCGATAATCGGACTATATTCAAGTTTTGTGCCGCCATTGATATACTCTCTGCTTGGGAGTTCTAGACATCTTGGGGTTGGTCCTGTGTCCATAGCCTCTCTGGTTATGGGTTCAATGTTAAGCGAATCAGTTTCTTTCGTTTCAGATCCAATCCTGTACCTCAAACTAGCTTTCACTGCCACCTTCTTCGCTGGTGTATTCCAATCCTCTCTCGGCTTTCTCAGGTTAGGGTTTGTGATTGATTTTCTGTCAAAGGCAACACTGGTGGGTTTCATGGCAGGGGCAGCCATTATAGTGTCTCTGCAACAGCTAAAAGGCTTACTCGGAATAACTCACTTCACTTCTAAGATGCAAATGATTCCTGTTATGTCCTCTGTTTTTAATCAAAGAGATGAGTGGTCATGGCAAACAATTGTACTCGGATTCGCCTTTTTGGCTTTCCTGCTTGTAACAAGGCACATTAGCATGAAGAAACCAAAACTATTCTGGGTGTCAGCAGCTGCTCCATTGACATCAGTTATTCTGTCAACAATTTTAGTTTTTCTTCTCAGAAACAAGACTCATGGAATTGCAATTATTGGACACTTACCAAAAGGCCTTAATCCACCATCCACGAACATGTTGGTCTTCGCTGGTCCTCATTTGGCACTTGCAATCAAAACTGGCATTATCACTGGGATTCTATCTCTTACTGAAGGAATTGCAGTAGGAAGAACATTTGCAGCACTTAAGAACTACCAAGTGGATGGAAACAAAGAAATGATGGCCATTGGTCTGATGAACATAGCAGGCTGTTGTTCTTCATGCTATGTCACCACAGGATCGTTTTCTCGATCGGCTGTCAACTACAACGCTGGAGCACAAACAGCCGTCTCAAACATAATAATGGCTGCAGCTGTTCTTGTGACCCTTCTGTTTCTCATGCCTCTGTTCTATTACACACCAAACTTCATCCTGGCAGCCATTATCATCACTGCTGTTGTAGGACTGATAGATTATCAAGCTGCATATAAACTGTGGAAAGTCGACAAGATTGATTTCTTGGCTTGTTTGTGCTCTTTCTTTGGTGTTCTGTTCATCTCAGTGCCTCTAGGCCTTGGCATTGCGGTGTCAATTTCAGTCTTAAAGATTCTGCTTCATGTGTCTCGGCCGAACACTATAGTGTTGGGGAACATACCAAGAACACAAATATATCACAACCTAAATAGATACAGAGAAGCTTTGAGGGTTCCTTCATTTCTCATTTTGGCTGTTGAATCTCCCATCTACTTTGCTAATTCAACATACTTGCAAGAAAGGATGCTAAGATGGGTCCGAGAAGAGGAAGAGCGCATAAAAGCAAACAATGAAAGTACATTGAAGTGCATAATTCTAGACATGACAGCTGTGACAGCCATAGACACAAGTGGAATCGACACATTACGAGAACTTAGAAAGATTCTGGAAAAAAGATCATTTCAGCTTGTGTTGACAAATCCTGCAGGGACAGTGATGGAAAAGTTGCATCAGTCAAATATCTTGGATTCCTTTGGGCAGAAAGGACTCTATCTCACAGTGGGAGAAGCTGTGGCTGACATTTCTCGGTCCTGGAAAGCTGAGCCTTGA 1968 0.44 MGLNSNRVEHFDSHNPTVVKIQTDIPSVEIHPVCLPPEQTTLQKLKRRLSEIFFPDDPLHGFKNQTRFDKLIMALQYLFPIFQWAPHYSLKLLRSDIISGLTIASLAIPQGISYAKLADLPPIIGLYSSFVPPLIYSLLGSSRHLGVGPVSIASLVMGSMLSESVSFVSDPILYLKLAFTATFFAGVFQSSLGFLRLGFVIDFLSKATLVGFMAGAAIIVSLQQLKGLLGITHFTSKMQMIPVMSSVFNQRDEWSWQTIVLGFAFLAFLLVTRHISMKKPKLFWVSAAAPLTSVILSTILVFLLRNKTHGIAIIGHLPKGLNPPSTNMLVFAGPHLALAIKTGIITGILSLTEGIAVGRTFAALKNYQVDGNKEMMAIGLMNIAGCCSSCYVTTGSFSRSAVNYNAGAQTAVSNIIMAAAVLVTLLFLMPLFYYTPNFILAAIIITAVVGLIDYQAAYKLWKVDKIDFLACLCSFFGVLFISVPLGLGIAVSISVLKILLHVSRPNTIVLGNIPRTQIYHNLNRYREALRVPSFLILAVESPIYFANSTYLQERMLRWVREEEERIKANNESTLKCIILDMTAVTAIDTSGIDTLRELRKILEKRSFQLVLTNPAGTVMEKLHQSNILDSFGQKGLYLTVGEAVADISRSWKAEP 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0836 655 PANTHER SULFATE TRANSPORTER 43 647 IPR001902 GO:0016020|GO:0055085
Lele42g0836 655 CDD STAS_SulP_like_sulfate_transporter 525 640 - -
Lele42g0836 655 Pfam Sulfate permease family 93 472 IPR011547 GO:0016020
Lele42g0836 655 Pfam STAS domain 525 643 IPR002645 -
Lele42g0836 655 SUPERFAMILY SpoIIaa-like 529 646 IPR036513 -
Lele42g0836 655 Gene3D STAS domain 504 649 IPR036513 -
Lele42g0836 655 ProSitePatterns SLC26A transporters signature. 122 143 IPR018045 GO:0008271|GO:0008272
Lele42g0836 655 ProSiteProfiles STAS domain profile. 524 647 IPR002645 -
Lele42g0836 655 TIGRFAM sulP: sulfate permease 80 643 IPR001902 GO:0016020|GO:0055085
Lele42g0836 655 FunFam Sulfate transporter 31 504 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0836 Lele-ChrLele42 21269331 21273794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0836 1 654 Inorganic Solute Cotransporters AT3G15990 76.453 0.0 1041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele42g0836 42 21269331 21273794 Lele37g0442 37 3617104 3618189 CCT
Lele42g0836 42 21269331 21273794 Lele38g0409 38 3279995 3281077 CCT
Lele42g0836 42 21269331 21273794 Lele39g0986 39 18689473 18690558 CCT
Lele42g0836 42 21269331 21273794 Lele40g0387 40 3123743 3124501 CCT
Lele42g0836 42 21269331 21273794 Lele43g0546 43 4919949 4924796 hybridization
Lele42g0836 42 21269331 21273794 Lele44g0510 44 3905950 3910360 hybridization