Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0830 ATGGATGAAAGCAACGATCGAAATTCTCCTTCAGTGAGGACAGGTGGCAGTTTTAAATCCACTTTGTCTGGAAGATCGACTCCACGAACCTCTCCGTCATTTCGGCGACTAAATTCTGGCAGAACACCAAGAAGAGAAGGCAGAAGTAGTTTTCCTAGTTCCCAGAGGTTTCGTGGCAATCGAGTACTGTTATGGTTGCTTCTCATTACCCTCTGGGCTTATCTTGGATTTCTTGTTCAGTCCAGGTGGGCACATAGTGATAAGAAGGATGAATTTTCAGGCTTTGGAATTGGAGGCAGGTTAAGTGACACAAACTCAGTTGTTGAACAGAGTAGGCGTCATGATTTGGTTGCTGGTGATAATTCCTTATCCCTTAATAATTACACAGTTAAACACGAGGTGCAGGATGGGAAAAAAATAGCCGTGGCTTTGGCCCAGAAAGAAGACGGGGTTCCATCTCCTCGCAAAACAAGCTCCAAGAAGAAGATTAGACGATCACGATCTAGAGTTAGAGCACGTCGGAAGCTGAAACCAACAGTGGAAGTTGAGAACAGAGACATAGAGGAGCAAGACTCAGAAATTCCTAAAAAGAATACTACCTATGGATTGCTTGTTGGTCCATTTGGCTTGACAGAGGATAAAATTCTGGAATGGAGTCCTGAGAAGCGTTCTGGAACCTGTAACAGGAAGGGGGACTTCGCACGTCTTGTATGGTCCAGGAGATTTATCTTAATATTCCATGAGCTTTCCATGACAGGAGCTCCACTTTCTATGATGGAGTTGGCGACAGAGCTTTTGAGCTGTGGGGCTAGTGTCTCTGCTGTTGTTCTTAGCAGGAAAGGTGGCTTGTTGCCAGAGCTAACTAGGAGACAAATCAAGGTGCTTGAGGATAGAGCTGATAACAGCTTCAAAACTGCAATGAAGTCTGATCTAGTCATTGCTGGATCAGCTGTTTGTGCTTCATGGATCGAACAATATATTGAACGTTTTCCTGCTGGTGCAAGTCAAGTTGCTTGGTGGATTATGGAAAACCGACGAGAGTACTTTGATCGTTCAAAGGCTGTCCTGCACAGAGTAAAACTGCTGGTATTCCTTTCTGAGTTGCAATCTAAGCAATGGCAAAAATGGTGTGAGGAAGAAAACATAAAACTGAGGTATCAGCCTGCACTGGTTCCATTGTCCGTGAATGATGAATTGGCTTTTGTAGCTGGCATTCCTTCTACACTTAATACTCCGTCCTTTAGTGCTGAGAAAATGTTAGAGAAAAGACAATTGTTAAGAGATGCAGTCCGAAAGGAAATGGGCTTGACTGATAATGATATGCTTGTGATGACTTTGAGTAGCATAAACCCAAGTAAGGGTCAGCTATTGCTTCTTGAATCAGCAAGCACGATAGTAGAACATGGGCATTTGCAAGATAGTAAAACCACGAAGAAATCATCAGATGTGGGAGAAGGCCTATCTACCCTGGCTAGAAGACATCATATTAGAAGTTTGATGCAATTGTTGAATGCTGACGGCAGAGCTTTGCATGATATCTCAAGCATACCTTTGAACAGAAGAAAGGTGTTGTCAAACAATGAAACATCCTTGGAGCAAACTCTCAGAATTCTTATTGGTTCTGTTGGAAGTAAAAGTAACAAAGTGGATTATGTTAAAGGTCTTCTGACTTACTTATCTCAGCATTCAAACTTGTCAAAGTCAGTTTTGTGGACTCCAGCAACAACACGTGTTGCCTCACTTTATTCTGCTGCAGATGTTTATGTCATAAATTCTCAGGGACTAGGAGAAACATTTGGGAGGGTGACTATCGAAGCAATGGCATTTGGTCTTCCGGTGCTTGGAACGGATTCTGGAGGAACACTAGAAATTGTTGAGCACAACGTTACAGGTCTTCTTCATCCTACTGGACGTCCAATGATTCCTGTCCTCGCGCAAAATCTACGGTTTTTACTTGAAAACCGGCCGGCAAGGGAACGAATGGGATTGGAGGGAAGAAAGAAGGTGCAAAGGATATACTTGAAGAAGCATATGTACAAGAGTTTCGTAGAGGTTATCGTTAGGTGCATGAGAAGCAAATAA 2082 0.4304 MDESNDRNSPSVRTGGSFKSTLSGRSTPRTSPSFRRLNSGRTPRREGRSSFPSSQRFRGNRVLLWLLLITLWAYLGFLVQSRWAHSDKKDEFSGFGIGGRLSDTNSVVEQSRRHDLVAGDNSLSLNNYTVKHEVQDGKKIAVALAQKEDGVPSPRKTSSKKKIRRSRSRVRARRKLKPTVEVENRDIEEQDSEIPKKNTTYGLLVGPFGLTEDKILEWSPEKRSGTCNRKGDFARLVWSRRFILIFHELSMTGAPLSMMELATELLSCGASVSAVVLSRKGGLLPELTRRQIKVLEDRADNSFKTAMKSDLVIAGSAVCASWIEQYIERFPAGASQVAWWIMENRREYFDRSKAVLHRVKLLVFLSELQSKQWQKWCEEENIKLRYQPALVPLSVNDELAFVAGIPSTLNTPSFSAEKMLEKRQLLRDAVRKEMGLTDNDMLVMTLSSINPSKGQLLLLESASTIVEHGHLQDSKTTKKSSDVGEGLSTLARRHHIRSLMQLLNADGRALHDISSIPLNRRKVLSNNETSLEQTLRILIGSVGSKSNKVDYVKGLLTYLSQHSNLSKSVLWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGLPVLGTDSGGTLEIVEHNVTGLLHPTGRPMIPVLAQNLRFLLENRPARERMGLEGRKKVQRIYLKKHMYKSFVEVIVRCMRSK 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0830 693 MobiDBLite consensus disorder prediction 8 54 - -
Lele42g0830 693 Pfam Glycosyl transferases group 1 556 667 IPR001296 GO:0016757
Lele42g0830 693 PANTHER BNAA05G14870D PROTEIN 8 693 - -
Lele42g0830 693 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 246 684 - -
Lele42g0830 693 MobiDBLite consensus disorder prediction 157 174 - -
Lele42g0830 693 MobiDBLite consensus disorder prediction 145 178 - -
Lele42g0830 693 MobiDBLite consensus disorder prediction 1 54 - -
Lele42g0830 693 Pfam Glycosyl-transferase family 4 238 407 IPR041693 -
Lele42g0830 693 CDD GT4_PimA-like 243 686 - -
Lele42g0830 693 Gene3D Glycogen Phosphorylase B; 415 673 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0830 Lele-ChrLele42 21215752 21219719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0830 16 691 Glycosyltransferase AT3G15940 60.699 0.0 800
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0388 38 3143368 3148918 Lele42g0830 42 21215752 21219719 CCT
Lele39g1015 39 18860814 18864776 Lele42g0830 42 21215752 21219719 CCT
Lele40g0367 40 3001708 3003100 Lele42g0830 42 21215752 21219719 CCT
Lele42g0830 42 21215752 21219719 Lele43g0552 43 4977148 4981068 hybridization
Lele42g0830 42 21215752 21219719 Lele44g0515 44 3961532 3964636 hybridization