Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0806 ATGGAGAACCTGAAAACACCCTTCAAGGGTGTAGTTAGTGATATTCGAGGAAGAGCCAAGTATTACAAGGAAGATTGGATTTCTGGTATCTGTTCAGGAATCGGGATATTGGCTCCAACTACCTATATGTTCTTTGCTTCTGCTCTTCCTGTTATAGCCTTTGGAGAACAGATCGATAGAGACACAGATGGAAGCTTGAGCTCAGTAGAAACACTAGCTTCAACTGCTATGTGTGGAATCATACATTCAATTATCGGGGGCCAGCCATTGTTAATACTCGGAGTTGCAGAACCCACTATCATCATGTACATTTACTTGTACAATTTTTCTAAAGATAGGGATGATTTGGGACGACAACTCTTCTTGGCTTGGGCTGGATGGGTTTGCGTTTGGACAGCACTGATGTTGATTCTTCTAGCAATATTCAATTCGGGAGCCATTATTAATAGATTAACCAGAATTGCCGGCGAACTTTTTGGCATGTTGATCACAGTCTTGTTCATTCAAGAGGCGATCAAGGGAATGGTGAGCGAGTTTAAGATTCCCAAACATGAAGACCGAAGTTTAGAGAAGTACAAATTTAATTGGCTTTATGTAAACGGAATATTGGGAATTATATTCACCTTTGGCCTTCTCTTTTCTTCTCTCAAGACCAGAAAAGCTAGATCATGGTTATACGGCACAGGCAAATTAAGAAGTTTCTTGGCAGACTATGGGGTTCCTTTAATGGTGGTATTGTGGACAGCTTTGTCTTTCACAGTACCAAGTCAACTTCCCTCTGGAGTTCCTAGAAGGCTCTTTGCTCCTCTTGCTCGGCAATCTGCATCATTACACCATTGGACTGTCATCAAAGACATGGGAAAGGTTCCACCTGCATATATTTTTGGTGCTATTATTCCTGCATTCATGATCGCGGGTCTTTACTTCTTCGATCATAGCGTTGCTTCTCAAATGGCACAACAGAAGGAATTCAATCTCAAGAAAACTTCTGCTTATCATTATGACGTTCTGCTTCTAGGGTTCATGACTTTGCTTTGTGGGTTGCTTGGTTTACCACCTTCTAATGGAGTTCTTCCTCAATCCCCCATGCACACCAAAAGCCTTGCTGTTCTCAAGAAACAGTTAATTCGAAGGAAGATGATGAAAAGTGTGAAAGAAAGCATAAGGAACAAAGCAAGCGGCTCTGAGATCTATGGAAACATTCAACAAGTGTTCGTAGAAATAGACAAAAGCCCAATTAACACAGTGGTGAAAGAATTAGAGGACCTGAAAGAAGCTGTGCTGAAAGAGGAGGAGAAAGAATCATTCGACCCAGAGAAACACATAGACAAACATCTGCCCATAAGAGTGAAAGAGCAAAGAGTGAGCAATCTGTTGCAAGCAATTCTTGTTGGAGCATCAGTGTTTGCTATGCCTGTGATAAAGAAGATACCCACTTCAGTTCTGTGGGGTTACTTCGCTTACATGGCCATTGATAGTCTTCCTGGAAATCAGTTCTGGGAAAGAATCATATTCATCTTCATATCTCCCAATAGACGATACAAGGTGTATGAAGGGGACCATGCTTCGTTTGTAGAGACGGTACCAGTGAGAGCGATTGTGTTCTTCACACTGTTCCAATTTGTGTATTTGTTGGTTGCTTTTGGAATGACATGGATTCCAATAGCAGGAATATTATTTCCTTTGCCTTTCTTTGTGTTGATCATAATAAGGCAGTATCTGCTTCCCAAGCTCTTCAATCCTCGGCATTTAAAGGAACTTGATGCTGCTGAATATGAAGAAATCGCTGCTACTCCAAGACTCTCCTTCCGTCTCTCTTCTTCCCAGGGTGCGGATTCAACAAGTATGGGATCGAGGGAAATGGGTGATGGTGAGATATTAGACGAGGCCACAACTGGTAGAGGAGAGTTGAAGCTCAAAACATTTAGCTTTAGATCAGAGGCACGTACACAGGCGTTGCAAGGAGATGAAATCGAGAGCGAATCAGATTCCTAA 1995 0.4201 MENLKTPFKGVVSDIRGRAKYYKEDWISGICSGIGILAPTTYMFFASALPVIAFGEQIDRDTDGSLSSVETLASTAMCGIIHSIIGGQPLLILGVAEPTIIMYIYLYNFSKDRDDLGRQLFLAWAGWVCVWTALMLILLAIFNSGAIINRLTRIAGELFGMLITVLFIQEAIKGMVSEFKIPKHEDRSLEKYKFNWLYVNGILGIIFTFGLLFSSLKTRKARSWLYGTGKLRSFLADYGVPLMVVLWTALSFTVPSQLPSGVPRRLFAPLARQSASLHHWTVIKDMGKVPPAYIFGAIIPAFMIAGLYFFDHSVASQMAQQKEFNLKKTSAYHYDVLLLGFMTLLCGLLGLPPSNGVLPQSPMHTKSLAVLKKQLIRRKMMKSVKESIRNKASGSEIYGNIQQVFVEIDKSPINTVVKELEDLKEAVLKEEEKESFDPEKHIDKHLPIRVKEQRVSNLLQAILVGASVFAMPVIKKIPTSVLWGYFAYMAIDSLPGNQFWERIIFIFISPNRRYKVYEGDHASFVETVPVRAIVFFTLFQFVYLLVAFGMTWIPIAGILFPLPFFVLIIIRQYLLPKLFNPRHLKELDAAEYEEIAATPRLSFRLSSSQGADSTSMGSREMGDGEILDEATTGRGELKLKTFSFRSEARTQALQGDEIESESDS 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0806 664 MobiDBLite consensus disorder prediction 606 632 - -
Lele42g0806 664 Pfam HCO3- transporter family 202 375 IPR011531 GO:0006820|GO:0016020
Lele42g0806 664 Pfam HCO3- transporter family 448 538 IPR011531 GO:0006820|GO:0016020
Lele42g0806 664 Pfam HCO3- transporter family 7 181 IPR011531 GO:0006820|GO:0016020
Lele42g0806 664 Gene3D Helical hairpin bin 18 59 - -
Lele42g0806 664 PANTHER ANION EXCHANGE PROTEIN 5 596 IPR003020 GO:0005452|GO:0006820|GO:0016020
Lele42g0806 664 Coils Coil 413 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0806 Lele-ChrLele42 20947397 20954247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0806 1 659 Antiporters AT1G74810 66.172 0.0 935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele42g0806 42 20947397 20954247 Lele37g0477 37 3938964 3940785 CCT
Lele42g0806 42 20947397 20954247 Lele38g0445 38 3622091 3622713 CCT
Lele42g0806 42 20947397 20954247 Lele39g0948 39 18351199 18352992 CCT
Lele42g0806 42 20947397 20954247 Lele43g0579 43 5209700 5218998 hybridization
Lele42g0806 42 20947397 20954247 Lele44g0539 44 4209162 4213764 hybridization