Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0783 ATGGCACTGGTTGTAGACGATCAAGAAATGCTGAGGAAGATCCATGTGAGAATACTGAACAATCTTGGAGTGAAGACCGTGGAGGCCGTGGAGAATGGGAAAGAGGCCGTCGACATTCACATAGCAGGACCAAGTTTTGACCTAATTCTCATGGACCTGGACATGCCAGTCATGAATGGCATCGAGGCGACGAAGGAACTTCGAGCAATGGGGATTAAAAGCAAAATCGCAGGCGTATCAGGAAGGAGAAAAGAAGCACGAGTTCAAGAGTTCATAGGAGCAGGCCTCGATCTGTTCCTGGAGAAACCCTTAACTGCTGACAAGCTCTCTTCCCTTAACCGCTGA 345 0.487 MALVVDDQEMLRKIHVRILNNLGVKTVEAVENGKEAVDIHIAGPSFDLILMDLDMPVMNGIEATKELRAMGIKSKIAGVSGRRKEARVQEFIGAGLDLFLEKPLTADKLSSLNR 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0783 114 SMART REC_2 1 113 IPR001789 GO:0000160
Lele42g0783 114 Pfam Response regulator receiver domain 3 110 IPR001789 GO:0000160
Lele42g0783 114 SUPERFAMILY CheY-like 3 110 IPR011006 -
Lele42g0783 114 Gene3D - 1 114 - -
Lele42g0783 114 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 112 - -
Lele42g0783 114 CDD REC_hyHK_CKI1_RcsC-like 3 109 - -
Lele42g0783 114 ProSiteProfiles Response regulatory domain profile. 1 114 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0783 Lele-ChrLele42 20806742 20807086 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0783 3 112 Response Regulator Gene Family AT3G04280 42.857 4.45e-20 77.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele42g0783 Response_reg 2.4e-23 CL0304