Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0769 ATGGCTTTTTGCCCAATCTTTTGTTTTGGAAAGGGTTCGGATCGCAAAGCACGAGGGAAAGCGCAACCAACATGGCGAGTCTTTTCCTTAAAGGAGCTACACTCAGCTACAAATAACTTCAATTATGATAATAAACTTGGAGAAGGTGGATTTGGCAGTGTTTACTGGGGCCAGCTTTGGGATGGATCACAAATTGCAGTGAAAAGATTGAAAGTATGGAGCAACAAAGCAGATATGGAATTTGCTGCTGAAGTCGAGATATTGGCAAGAGTTCGACACAAGAATCTTCTTAGTCTGCGGGGCTATTGTGCTGAAGGACAGGAACGGTTAATCGTATATGACTATATGCCAAATTTGAGCTTACTCTCTCATCTTCATGGACAGCACTCAGCAGAATGCCTTCTGAATTGGAGCCGACGGATGAGTATTGCAATCGGATCAGCAGAGGGAGTCGCATATCTCCACCATCAAGCAACTCCACACATCATCCACAGAGACATTAAAGCAAGCAATGTGCTCTTGGATGCAGATTTTGGGGCTCAGGTTGCAGATTTCGGTTTCGCTAAGTTGATCCCTGAGGGGGTGACTCATGTGACTACGAGAGTTAAGGGTACCCTTGGCTATCTTGCACCTGAGTATGCTATGTTAGGTAAAGCATCTGAGAGTTGTGATGTCTACAGTTTTGGAATTCTCTTGCTGGAACTCGCAACTGGCAGGAAACCAATTGAGAAACTGAGTGCGACGGTGAAGCGGTCAATAACCGATTGGGCACTACCGTTGGTTTTAGAGAAGAAATTTAGTGAAATTGTAGATGCAAGACTAAATGGTGACTACGTGGAGGAAGAGCTTAAAAGGGTTGTTTATGTTGCACTTGTTTGTGCTCAGAATCAGCCGGAGAAGAGACCCAACATGCTGGAGGTGGTAGAGCTATTGAAGGGAGAATCTAAGTGTTCTCAGCTAGAGAATCATGAACTTTTCAGAAGCCCTCAACCTGCTGATTCCCACGACGACGACAGGATACAACCTGCTGAAGATAGTTCTGACTTTATATCAGCAGCAGATGAATCAAAACCTGAGTTGAAGGAGACCCCTGATCCATAA 1101 0.4469 MAFCPIFCFGKGSDRKARGKAQPTWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKADMEFAAEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHGQHSAECLLNWSRRMSIAIGSAEGVAYLHHQATPHIIHRDIKASNVLLDADFGAQVADFGFAKLIPEGVTHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELATGRKPIEKLSATVKRSITDWALPLVLEKKFSEIVDARLNGDYVEEELKRVVYVALVCAQNQPEKRPNMLEVVELLKGESKCSQLENHELFRSPQPADSHDDDRIQPAEDSSDFISAADESKPELKETPDP 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0769 366 PANTHER OS01G0253100 PROTEIN 22 316 IPR045271 -
Lele42g0769 366 SUPERFAMILY Protein kinase-like (PK-like) 22 311 IPR011009 -
Lele42g0769 366 Gene3D Phosphorylase Kinase; domain 1 11 115 - -
Lele42g0769 366 SMART serkin_6 40 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0769 366 ProSitePatterns Protein kinases ATP-binding region signature. 46 68 IPR017441 GO:0005524
Lele42g0769 366 MobiDBLite consensus disorder prediction 322 366 - -
Lele42g0769 366 FunFam PTI1-like tyrosine-protein kinase At3g15890 12 115 - -
Lele42g0769 366 Pfam Protein tyrosine and serine/threonine kinase 42 311 IPR001245 GO:0004672|GO:0006468
Lele42g0769 366 Gene3D Transferase(Phosphotransferase) domain 1 116 327 - -
Lele42g0769 366 ProSiteProfiles Protein kinase domain profile. 40 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0769 366 PIRSF ILK 10 326 - -
Lele42g0769 366 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Lele42g0769 366 FunFam PTI1-like tyrosine-protein kinase At3g15890 116 325 - -
Lele42g0769 366 MobiDBLite consensus disorder prediction 328 366 - -
Lele42g0769 366 CDD STKc_IRAK 46 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0769 Lele-ChrLele42 20715449 20718377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0769 28 322 Trihelix Transcription Factor Family AT1G70460 51.171 5.64e-99 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Lele42g0769 Pkinase 2.8e-43 CL0016