Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0767 ATGAGTAAGAGGGGAACCCCAACAAAACCCCCAGAGATTCGATCCTCTTTTAGTTCCCTGACCCTTGTTCCCGCTTTGGATAATTGGATTTTCAATTGGATTTTGGGGATCAGGGTCGGTGGAGGAACTGGGAGAAGAAAGTTAGAAGAACAATTTGGTATTGGAACGATGTCTGCTGCGGTTTGTGGGAGCAAGAGATCTTTCTTTGAAGATATTCCTCCGTCACCTCCGGTATCGAAGAGGCTTCGTTGCTCATCTTCTCCAATTCGTTTCTCCGCACCGAGCCTCGTCGATCAGCTTCAGGCGGTGTTCCCTCAAATGGAAGTTCAGCATCTTGAGATAGCTCTCCAAGAATGTGGAAATGATCTAGATGTTGCTACCAAAAGCTTGCATGAGCGTTGCTTGGGATCTGCTGATGGAAATTCTGGTGCTACTGAACAATCCAATGCTAATGTGGTAACAGGTACCTTGAGAGATGATGGGCGTGCTTCTGCTTCTGAGAACCAATCAGCTTCAAACGACCTTCCTGCAGATGGAGCAGAATGGGTTGACTTGTTTGTGAGGGAAATGACGAGTGCTATCAGCGTTGATGATGCTAGAATCCGTGCTTCTAGAATGTTGGGGGTTTTGGAGAGATCAATCAGTGGGCATGCAAGTGCTGAGGCAACACACGTTATTCAAAAGGAAAATATGATGTTGAAAGAGCAAATTGAAGGGCTGACTAGGGAGAATACTATTTTAAAGAGTGCTTTTAAAATCCAGCATGAACGTCAGATTGAGTACGAAAATAAGAGTCAAGAGTTGCAGCAGATGAAGCAATTGATGGCTCAATACCAGGAACAGTTGAGAACTCTTGAGGTGAATAACTATGCTTTGGCAATGCATCTGAAGCAGGCTCAGCAGTGCAACTCCTTTCCGGGGCATTTCAATCCTGATGTCTTCTAA 945 0.4519 MSKRGTPTKPPEIRSSFSSLTLVPALDNWIFNWILGIRVGGGTGRRKLEEQFGIGTMSAAVCGSKRSFFEDIPPSPPVSKRLRCSSSPIRFSAPSLVDQLQAVFPQMEVQHLEIALQECGNDLDVATKSLHERCLGSADGNSGATEQSNANVVTGTLRDDGRASASENQSASNDLPADGAEWVDLFVREMTSAISVDDARIRASRMLGVLERSISGHASAEATHVIQKENMMLKEQIEGLTRENTILKSAFKIQHERQIEYENKSQELQQMKQLMAQYQEQLRTLEVNNYALAMHLKQAQQCNSFPGHFNPDVF 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0767 314 CDD CUE 95 130 - -
Lele42g0767 314 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 57 314 - -
Lele42g0767 314 Coils Coil 261 288 - -
Lele42g0767 314 SUPERFAMILY UBA-like 95 136 IPR009060 GO:0005515
Lele42g0767 314 ProSiteProfiles CUE domain profile. 92 138 IPR003892 GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0767 Lele-ChrLele42 20694457 20699388 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0461 38 3734753 3738155 Lele42g0767 42 20694457 20699388 CCT
Lele39g0932 39 18234998 18239140 Lele42g0767 42 20694457 20699388 CCT
Lele40g0433 40 3572382 3575928 Lele42g0767 42 20694457 20699388 CCT
Lele42g0767 42 20694457 20699388 Lele43g0622 43 5498404 5507927 hybridization
Lele42g0767 42 20694457 20699388 Lele44g0574 44 4465341 4468198 hybridization