Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0743 ATGAACGATAATTTCTTCTTCCTTCCAGCTAATCCCACAATACCATGCAGCCGGGTTACCGCCACAAACGCGCCCCCTTCACCGCCACCTTTGGAGGGAATCGCCGCCGTGGTGGGTCAGCACGTGCTCTTCGGACACAACCACGGATCCACCTACGCCACTGCTAACATTAACAGCAAAAACGACAACCTCAACGGCTCAAAAGCTTTCATGTCGGTGCAGAAACGAGCAGACAAGAGCACAACAACGGGTGGGAGTAGTCTGTCGGTGAACAAGAGCTACAGGGGAGTGAGGAAGAGGCCGTGGGGGAGGTGGTCGGCGGAGATACGCGACCGAATCGGACGGTGCCGGCACTGGCTGGGTACGTTCGACACGGCAGAGGAAGCGGCCCGCGCGTACGACGCGGCTGCGAGGCGACTGAGAGGCGCTAAAGCAAGGACCAACTTCGAGATACCTTCAGTACTTCCATTGCCATCACCTTCTTCTTCGTCTTCAAATTCGACCTCAGAAGTGAAAAGCAAAGGGAAGGCCATGGGGATTGGTGCTAAGAAATGCTGTGTGGTTAACTCTGTATCTCAATTGTTCGGTGTGGTGCCTGAGACTATGAGAGAGAACCATGATAGTAATGAGAAGAAGACAAGTTATTCAGGTTTCGGTAACAATGTAGAACTAGACTTAAAGCTAGGTAGATCCACTAGAATGGTCATGTAG 711 0.5246 MNDNFFFLPANPTIPCSRVTATNAPPSPPPLEGIAAVVGQHVLFGHNHGSTYATANINSKNDNLNGSKAFMSVQKRADKSTTTGGSSLSVNKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGAKARTNFEIPSVLPLPSPSSSSSNSTSEVKSKGKAMGIGAKKCCVVNSVSQLFGVVPETMRENHDSNEKKTSYSGFGNNVELDLKLGRSTRMVM 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0743 236 SUPERFAMILY DNA-binding domain 93 150 IPR016177 GO:0003677
Lele42g0743 236 MobiDBLite consensus disorder prediction 154 172 - -
Lele42g0743 236 ProSiteProfiles AP2/ERF domain profile. 93 150 IPR001471 GO:0003700|GO:0006355
Lele42g0743 236 Pfam AP2 domain 93 142 IPR001471 GO:0003700|GO:0006355
Lele42g0743 236 SMART rav1_2 93 156 IPR001471 GO:0003700|GO:0006355
Lele42g0743 236 CDD AP2 92 151 IPR001471 GO:0003700|GO:0006355
Lele42g0743 236 FunFam Ethylene-responsive transcription factor 2 92 151 - -
Lele42g0743 236 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 72 197 - -
Lele42g0743 236 Coils Coil 126 146 - -
Lele42g0743 236 Gene3D AP2/ERF domain 92 151 IPR036955 GO:0003700|GO:0006355
Lele42g0743 236 MobiDBLite consensus disorder prediction 152 172 - -
Lele42g0743 236 PRINTS Ethylene responsive element binding protein signature 116 132 IPR001471 GO:0003700|GO:0006355
Lele42g0743 236 PRINTS Ethylene responsive element binding protein signature 94 105 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0743 Lele-ChrLele42 20454823 20455533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0743 78 169 AP2-EREBP Transcription Factor Family AT1G12980 57.609 2.07e-28 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele42g0743 AP2 2.8e-15 CL0081