Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0733 ATGGAACTTCTTCAAAGATCAGAGCCACCATCATGTTCATCTGAAAATTTGAACTTCATCTCATTTTCTTCAGATGCTCCACCATCACCAGCAGCATGCCCAAAACCCCCCACAATGGAGAGAGACACACAAAAAAAAGATTATCAAACACACCCACATGTTCAGCTGAATCTAAATCTCTCTAATGAGGAATCAGCGGATGGATCAAAGCCGGAACTCAACCTCATCAATTGTTTTGATCATGCCAAGTCATCCTTAAACTCCTCAGAATCTTCTTCTCATGACTTGGAACCGAGGATTTTCTCATGCAACTACTGCCAGAGGAAATTTTATAGTTCACAGGCCCTTGGAGGACACCAGAATGCACACAAGCGTGAGAGGACTCTGGCCAAAAGAGGGCATAAAGTTGGAGCTGCGTCAGTTTCAGTAGAATTTGGACAGAGGTACACTAGCATGGCTTCTCTTCCCTTGCATGGCTCATATAACAACAACAAATCACTTGGGATTCAAGCACATTCTATGATTCACAAGCCCTCTCATCAAGCTCCCATTCTCGGTTTACCGCGTTTCCATGGTCAAAATTCCTGGTGGAGGCTGCCTTTAGATTCACAAGCAGCAATTGGGAAGCTTCCTTCTGGAAAAGTTCATATGGGAGATGAAAAAACCGAAGCTTCCTTTTCCGGTGGGGTTTCAAGGTTAGCTAAGTTTTCTCCAAATATGGTGGTGAAAGAGGGAATTGGAGCTTACTGGTTGGGAAGTGTTACTCATGTAAAATCTAAACAAGAAGAGTTGCAGAAGCTTGACTTGTCCCTCAAACTCTAA 822 0.4343 MELLQRSEPPSCSSENLNFISFSSDAPPSPAACPKPPTMERDTQKKDYQTHPHVQLNLNLSNEESADGSKPELNLINCFDHAKSSLNSSESSSHDLEPRIFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGHKVGAASVSVEFGQRYTSMASLPLHGSYNNNKSLGIQAHSMIHKPSHQAPILGLPRFHGQNSWWRLPLDSQAAIGKLPSGKVHMGDEKTEASFSGGVSRLAKFSPNMVVKEGIGAYWLGSVTHVKSKQEELQKLDLSLKL 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0733 273 SUPERFAMILY beta-beta-alpha zinc fingers 98 128 IPR036236 -
Lele42g0733 273 MobiDBLite consensus disorder prediction 7 25 - -
Lele42g0733 273 FunFam Zinc finger protein 2 79 148 - -
Lele42g0733 273 MobiDBLite consensus disorder prediction 1 48 - -
Lele42g0733 273 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 12 273 IPR044246 GO:0009788
Lele42g0733 273 ProSitePatterns Zinc finger C2H2 type domain signature. 103 123 IPR013087 -
Lele42g0733 273 Gene3D Classic Zinc Finger 80 149 - -
Lele42g0733 273 ProSiteProfiles Zinc finger C2H2 type domain profile. 101 128 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0733 Lele-ChrLele42 20370507 20371328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0733 56 273 C2H2 Transcription Factor Family AT5G25160 44.828 5.78e-49 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele42g0733 None None None