Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0724 ATGGCCAGAGTTAACGAACAGGCCCTGCATCAGAACCAGAACGACAGCCCCAGGAGCATTCTGTTCAACAAGTACGAGATGGGGAGGCTCCTGGGTCAAGGAAATTTCGCCAAGGTGTATTACGCCAGGAACCTTGTGACGAACGAGAGCGTCGCGATTAAGGTTATCAAGAAAGAGAAGCTCAAGAAAGAGAGGCTCGTGAGGCAGATCAAGCAAGAGGTATCTGTGATGCGATTGGTTCGTCACCCTCACATCGTCGAGCTCAAGGAAGTTATGGCAACAAAAGGCAAGATCTTTCTGGTTATGGAGTATGTTAGAGGTGGAGAATTGTTCTCCAAGGTTGCTAAAGGCAGGCTTAAAGAAGATGTCGCCAGAAAATATTTCCAGCAATTGATTAGCGCCATTGATTTCTGTCACAGCCGTGGAGTCACGCACCGTGATCTGAAACCTGAGAATCTACTTTTGGACGAGAACGAAGATCTCAAGGTTTCCGATTTCGGGTTGTCGGCGTTGCCGGAGCAGCGTCGGTCCGACGGGATGCTCATCACGCCGTGTGGAACGCCTGCTTACGTGGCGCCGGAGGTGTTGAAGAAGAAAGGGTATGATGGATCGAAAGCTGATATTTGGTCATGTGGTGTGATTCTATATGCTCTGCTTTCTGGGTATCTTCCATTTCAGGGTGAGAATATTATGAAGATTTACAAGAAAGCATTCAAAGGTGAGTACGAATTCCCGGATTGGATTTTACCGGAAGCTAAGAATTTCATCTCTAATCTTCTAGTCGCCGACCCAGAAAAGAGATACTCGATCCCAGATATCATGAAGGATCCATGGTTTCAAATCGGATTCATGAGACCAATCGCGTTTTCGATAAAGAAGGAACCAGGTTTCGATTTCGACGAGGAGGAGAATAGCAATAATAATGAAGTGAAAGATCAGACAGAAGAAGAAAGAGGAGGAGAAGCAGTAGCAATAAAATCAGAGAAACCATCACGACCATTTTACAATGCCTTCGAGATAATCTCATCATTATCAAATGGGTTTGATCTAAGGAGCTTGTTCGAGACACGAAAGAGGTCGCCGTCCATGTTCCTGTCGAAGCTTTCGGCTCTGACGGTTGTGGCGAAGCTGGAGACGGTGGCGAAGAAGCTGAATTTTAAGATCACAGGGAGGAAGGATTATAAGGTGAGGATGCAGGGGGAAACAGAGGGAAGAAAGGGGAAGCTGGCCATGACGGTGGAGGTGTTCGAGGTGGCGCCGGAGGTGGCGGTGGTGGAATTATCCAAGTCTTCCGGCGATACACTCGAGTACATAACGTTCTGTGAGGAAGAAGTGAGGCCTGCACTGAAAGACATAGTCTGGAGTTGGCAAGGAGACAGTGCAAATAATAATAATAATAATTAG 1404 0.4701 MARVNEQALHQNQNDSPRSILFNKYEMGRLLGQGNFAKVYYARNLVTNESVAIKVIKKEKLKKERLVRQIKQEVSVMRLVRHPHIVELKEVMATKGKIFLVMEYVRGGELFSKVAKGRLKEDVARKYFQQLISAIDFCHSRGVTHRDLKPENLLLDENEDLKVSDFGLSALPEQRRSDGMLITPCGTPAYVAPEVLKKKGYDGSKADIWSCGVILYALLSGYLPFQGENIMKIYKKAFKGEYEFPDWILPEAKNFISNLLVADPEKRYSIPDIMKDPWFQIGFMRPIAFSIKKEPGFDFDEEENSNNNEVKDQTEEERGGEAVAIKSEKPSRPFYNAFEIISSLSNGFDLRSLFETRKRSPSMFLSKLSALTVVAKLETVAKKLNFKITGRKDYKVRMQGETEGRKGKLAMTVEVFEVAPEVAVVELSKSSGDTLEYITFCEEEVRPALKDIVWSWQGDSANNNNNN 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0724 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Lele42g0724 467 Pfam NAF domain 334 389 IPR004041 GO:0007165
Lele42g0724 467 FunFam Non-specific serine/threonine protein kinase 330 454 - -
Lele42g0724 467 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 13 449 - -
Lele42g0724 467 Gene3D Kinase associated domain 1, KA1 338 455 - -
Lele42g0724 467 Coils Coil 53 73 - -
Lele42g0724 467 FunFam Non-specific serine/threonine protein kinase 17 104 - -
Lele42g0724 467 FunFam Non-specific serine/threonine protein kinase 18 322 - -
Lele42g0724 467 CDD CIPK_C 336 450 - -
Lele42g0724 467 ProSitePatterns Protein kinases ATP-binding region signature. 31 58 IPR017441 GO:0005524
Lele42g0724 467 SMART serkin_6 25 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0724 467 Pfam Protein kinase domain 25 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0724 467 ProSiteProfiles NAF domain profile. 330 355 IPR018451 GO:0007165
Lele42g0724 467 Gene3D Transferase(Phosphotransferase) domain 1 18 337 - -
Lele42g0724 467 MobiDBLite consensus disorder prediction 297 322 - -
Lele42g0724 467 ProSiteProfiles Protein kinase domain profile. 25 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0724 467 SUPERFAMILY Protein kinase-like (PK-like) 21 280 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0724 Lele-ChrLele42 20277516 20278919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0724 20 464 CBL-interacting serine-threonine protein kinases AT5G25110 63.371 0.0 578
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele42g0724 Pkinase 2e-75 CL0016