LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele42g0720	ATGTCTCTGAAGATAGCGGATGAAAGTTGGCCAAAACCACCATTAGAGACGGCGAAGTCAACGGATGAAGCGGTGGTGGTGAGAGAGTATGATGAAGAGAGACACAAAATGGCAGTAGAGAAAATGGAGAGTCTTTGTGAGGTTGGCCAGAGGGGGAAGCCATCTTTGGTCACAGACCTTATGGGCGACCCCATATGCCGAATTCGCCACTTCCCAATTCACATCATGCTGGTTGCAGAATATGGAGAAGAAGAAGTTGTTGGAGTGATAAGGGGATGTGTGAAAACAGTTGCAAGAGGGAGTTCAGTTTATGTAAAGGTAGCTTATCTTTTGGGGCTCAGGGTCTCCCAAACAAGAAGGAGACTTGGCATTGGCAAAAAACTAGTTGAACAGTTAGAGGAGTGGTGCAAGCAGAAGGGCGCAAAGTATGCATATATAGCAACAGATTATACAAATGAACCATCCATCAATTTGTTCACAAAAAAATGTGGCTACTCAAAGTTCAGAAGTCTAACCATGTTGGTGCAACCTGTTCATGCTCACTACAAGCATATAAGCTCGAGCATCGCCGTGGTTCGGCTTCCACCATGCCTAGCCAGGTCCATATATAACCAGTTGCTTGCAAATTCAGAATTTCACCCAGAAGACGTTGAGTTAATCTTGTCTAACAAGCTCAATTTAGGGACCTTCATGGCCATCCCCAATAGATACCTATCCAAGTGGGATCCAAAAACAGGGATTATTCCTCCAAGTTTTGCCATTTTAAGCGTGTGGAATACAAAGGAAGTGTTCAGGTTACAGGTGAAGGGTGTTTCGCGACTAGCACACGCCTTCTGTACAGCGACAAGGATGTTAGATTCATGGGTGCCATGTTTAAGGTTACCTTCATTTCCTGATGTGTTTAAGCCATTTGGGGTTTATTTCTTGTATGGATTACACATGGAAGGGAAGAATAGTAGGGATCTAATGAGGTCTTTGTGTGGATTTGTTCATAACATGGCTAGGGATGATGGTGGTTGTGGGGCAGTTGTAACTGAACTAGGGCAAAGGGACCCAGTTAGAGAGGCAGTCCCACATTGGAGGAAGTTCTCATGGGCAGAGGACATGTGGTGCATCAAGAAACTGGAAAAATCTGAGCCATCATCGTTTGATTGGATCATATCCAGATCCTCTTCACCAGTAATTTTTGTTGACCCTCGTGACTTTTGA	1209	0.445	MSLKIADESWPKPPLETAKSTDEAVVVREYDEERHKMAVEKMESLCEVGQRGKPSLVTDLMGDPICRIRHFPIHIMLVAEYGEEEVVGVIRGCVKTVARGSSVYVKVAYLLGLRVSQTRRRLGIGKKLVEQLEEWCKQKGAKYAYIATDYTNEPSINLFTKKCGYSKFRSLTMLVQPVHAHYKHISSSIAVVRLPPCLARSIYNQLLANSEFHPEDVELILSNKLNLGTFMAIPNRYLSKWDPKTGIIPPSFAILSVWNTKEVFRLQVKGVSRLAHAFCTATRMLDSWVPCLRLPSFPDVFKPFGVYFLYGLHMEGKNSRDLMRSLCGFVHNMARDDGGCGAVVTELGQRDPVREAVPHWRKFSWAEDMWCIKKLEKSEPSSFDWIISRSSSPVIFVDPRDF	402

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele42g0720	402	Gene3D	-	60	175	-	-
	Lele42g0720	402	CDD	NAT_SF	76	146	-	-
	Lele42g0720	402	PANTHER	ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN	22	402	-	-
	Lele42g0720	402	Pfam	Acetyltransferase (GNAT) family	70	165	IPR000182	GO:0016747
	Lele42g0720	402	ProSiteProfiles	Gcn5-related N-acetyltransferase (GNAT) domain profile.	25	195	IPR000182	GO:0016747
	Lele42g0720	402	SUPERFAMILY	Acyl-CoA N-acyltransferases (Nat)	71	172	IPR016181	-
	Lele42g0720	402	FunFam	Putative N-acetyltransferase HLS1	40	170	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele42g0720	Lele-ChrLele42	20226561	20228636	Dispersed/Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	GNAT	Lele42g0720		Acetyltransf_1	1.1e-17	CL0257