Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0713 ATGCCTTCCAGATCCTTCCCTTCCAGCCCCAACGCTGCAAGTTCAAGTTTTTTCATTAAAACCAGAGTCATCTTCCTCGCCCTCACAATCTCAGCTTCTGTTGTAATTCTATGCTCTATCATCTACTTTCTTTACCACTTATGGCATTCTATAGTACACAGAGCTAAAACCATCCCCTTTGATTCGAGTGCTCCTTTGAAGCTCGAAAGATTCTCGTACAAAGAATTGAAGCAAGCCACCAATGGCTTCGACGTCGCCAATGTAATTGGTAAAGGAGGCTCTGGAACTGTCTTCAGAGGAACACTTAAAGATGGGAAATTGATTGCAATTAAGAGGCTAGACGCCTTGTCTTTACAAACAGAGCGAGAGTTTCAGAATGAGCTTCAGATTCTTGGTGGGTTAAGATCTCCTTTTATTGTAACCCTTTTGGGGTATTGTGTTGAAAAAAACAAGAGAGTTCTGGTGTATGATTACATGCCAAATAGAAGCTTGCAGGAGTCGCTATTCGGAGAAGATGATGATGGGTGTTTATGTTTGAGCTGGGAGAGAAGGTTCCACATCATTCTAGATGTTTCTAGAGCCTTGGAATTCTTGCACCTTGGTTGTGATCCTCCAGTGATTCATGGTGATGTTAAGCCAAGCAATGTTCTTCTTGATTCAAACTTCAGAGGGAAGATTTCAGACTTTGGATTGTCAAGGATCAAAGTGGAGAATGAATTTGGTGTAGATTTGTTTAGCCAGGACTTGGGGAAGAGTCAAGAACTATGGAAAAGCCAAGAAATTTCAGGTAATTTAACTGCTGAAACTACTCCAACTGCAGCTATTAGTACACCAGTTGAGAGTGTTAATAATGAAGTAGATTTTGCTTTAGCTTTGCAAGCATCTTCTTCATCTAAAAATAGCAAGACATGTTTTAATGTTAAAGCTTTGAGCTTGAATTCTTTCAATTACAACGCCAATATTGCAAATGAGAGTGAAATCAGGAGTTGTTGTAATGCAAAGGGAAAGGAAATATCAACTCTAGATAATATTGGTGGGGATGATTGGAATAAGAAATTTGTTCCTTATGATGATGAGTTCTCTAGTATTGATCATAGTAAGGAATTAAGTTGTGTAAATGCTTCTTCTGTGGATGATGAGAAAATAAACGGGAAACAACAATGGGGAAAAGATTGGTGGTGGAGACAAGATGGAACTGATGAATTATGTAGCAGAGATTATGTGATGGAGTGGATTGGGAGTCAAATTTGTCCATCAAACCCAGATTGGGTAGAAGAAAAGAAGAACATTAATGAAAAACCAGAGTTGGAAACTTCAAGTCCTGTGGATCATCATAAAGCAGATGAAGCAAATGGGCCCCAATTACAAGCATTTGTAGTAGGAGATACCGATAACGTGGTTGGGAAGAAGAAAGAAGCGAGGGGGAAGAAAAACCGGAAGAAAAACCTGAGGAAGATGCAAGAATGGTGGAAAGAAGAGCACCTTGCTGAATTAAGCAAGAAGAGTAATAGTAGTAAGCTGAAGAATCTTCAAGCCAAGTGGAAGAAAGGCTTCAAAGTGCCACATTTTGACTTGGGAAGAAGGTTTTATCTTTGCAGGCGAAGAAGAAACTTCACCTGCGAAGAAGCTCAGGATGATGGGAGCGATCAAAATGGTGGCGAGTTCAGCTTCAGAAGAGGTTGGAGGAAGAAAAGTACTCGTTCCATTGGGACCGACATGTGGAGCGGAGATCTTTTCAGCCGTGAGCTCAGCAGCACGACCAGCATGAGAGGAACACTGTGTTATGTTGCACCAGAATATGGAGGCTGTGGATATTTAATGGAGAAAGCTGATATTTACAGTTTAGGAGTTTTGATCCTTGTGATTGTATCAGGAAGAAGACCATTACATGTTCTTGCATCTCCAATGAAGTTAGAGAAAGCCAACTTAATAAGCTGGTGCAGGCACTTGGCTCATTCTGGTAACATTTTAGAGTTAGTAGATGAGAGACTGAAGGAATATTTCAAGAAGGAGCAAGCAAGCTTGTGTATCAACTTGGCACTTGCTTGCTTACAAAAGATTCCAGAATTGAGGCCGGATATCGGCGACATTGTCAAGATTTTGAGGGGTGAAATGGAGCTTCCACCGCCGCCATTTGAGTTTTCACCATCTCCTCCTTCCAAGTTTTACCACAAATCAAGGACAAAACAGAAGAGACCTACAGAATAA 2208 0.4081 MPSRSFPSSPNAASSSFFIKTRVIFLALTISASVVILCSIIYFLYHLWHSIVHRAKTIPFDSSAPLKLERFSYKELKQATNGFDVANVIGKGGSGTVFRGTLKDGKLIAIKRLDALSLQTEREFQNELQILGGLRSPFIVTLLGYCVEKNKRVLVYDYMPNRSLQESLFGEDDDGCLCLSWERRFHIILDVSRALEFLHLGCDPPVIHGDVKPSNVLLDSNFRGKISDFGLSRIKVENEFGVDLFSQDLGKSQELWKSQEISGNLTAETTPTAAISTPVESVNNEVDFALALQASSSSKNSKTCFNVKALSLNSFNYNANIANESEIRSCCNAKGKEISTLDNIGGDDWNKKFVPYDDEFSSIDHSKELSCVNASSVDDEKINGKQQWGKDWWWRQDGTDELCSRDYVMEWIGSQICPSNPDWVEEKKNINEKPELETSSPVDHHKADEANGPQLQAFVVGDTDNVVGKKKEARGKKNRKKNLRKMQEWWKEEHLAELSKKSNSSKLKNLQAKWKKGFKVPHFDLGRRFYLCRRRRNFTCEEAQDDGSDQNGGEFSFRRGWRKKSTRSIGTDMWSGDLFSRELSSTTSMRGTLCYVAPEYGGCGYLMEKADIYSLGVLILVIVSGRRPLHVLASPMKLEKANLISWCRHLAHSGNILELVDERLKEYFKKEQASLCINLALACLQKIPELRPDIGDIVKILRGEMELPPPPFEFSPSPPSKFYHKSRTKQKRPTE 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0713 735 FunFam Receptor-like serine/threonine-protein kinase At4g25390 558 707 - -
Lele42g0713 735 FunFam Receptor-like serine/threonine-protein kinase At4g25390 52 158 - -
Lele42g0713 735 SUPERFAMILY Protein kinase-like (PK-like) 62 723 IPR011009 -
Lele42g0713 735 SMART serkin_6 83 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0713 735 MobiDBLite consensus disorder prediction 709 735 - -
Lele42g0713 735 Pfam Protein kinase domain 85 236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0713 735 Pfam Protein kinase domain 584 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0713 735 Gene3D Transferase(Phosphotransferase) domain 1 563 707 - -
Lele42g0713 735 Gene3D Transferase(Phosphotransferase) domain 1 159 269 - -
Lele42g0713 735 FunFam putative receptor-like protein kinase At1g80870 159 273 - -
Lele42g0713 735 ProSiteProfiles Protein kinase domain profile. 83 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0713 735 PANTHER OS07G0586332 PROTEIN 1 730 IPR044576 -
Lele42g0713 735 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Lele42g0713 735 Gene3D Phosphorylase Kinase; domain 1 59 158 - -
Lele42g0713 735 ProSitePatterns Protein kinases ATP-binding region signature. 89 111 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0713 Lele-ChrLele42 20178980 20181187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0713 569 701 Receptor kinase-like Gene Family AT3G58690 29.851 3.05e-12 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Lele42g0713 Pkinase 5.9e-27 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele42g0713 42 20178980 20181187 Lele43g0671 43 6000047 6002251 hybridization
Lele42g0713 42 20178980 20181187 Lele44g0628 44 4991789 4993993 hybridization