Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0712 ATGGAGGGATTGCGTAAGCGAGTCCTTTTTAAGAATCAACTGAATTTCTCCTTGGAGCCAACCTTGATAATGGCAGACCTCAAAGAGCGGCTACTACTTCCCCCAAAACCAGCATCAGCTCTTAATTTGAGAGAGGCAGTCAATCGACCATCGGCATCTGGAAGACAGCCCTTACAAGGAGTGGATGTTTTGGGGCTAAAGAAGCGGGGTCAAGGTCTTCGATCATGGATTCGCGTTGACACATCTGGAAACTCTCAGGTTATTGAAGTAGACAAGTTCACTATGATGCGACGGTGCGACCTACCTGCACGTGATCTTCGCCTACTAGATCCTTTGTTTGTGTACCCATCAACTATCTTGGGAAGAGAAAAGGCTATTGTTGTAAATCTTGAGCAGATACGGTGTATTATTACAGCAGATGAAGTTCTTCTCTTGAATTCCCTAGATAGTTATGTATTACACTATGTGATGGAGTTGCAACGTCGGCTAACTACTGCTGGGGTAGGTGAGGTTTGGCAGTTGGACAATTCTGATATGAGCAGAAGAAGAGGAAGTAGGAATGTCGACAATTCCTTTAACAACACATCCCCTGATTATCTGCCTTTTGAGTTTAGGGCTCTTGAAGTTGCCTTGGAGTCAGCATGCACATTTCTTGACACTCAGGCAGCAGAGTTAGAAATTGAGGCCTATCCTTTACTGGACGAGTTAACGTCAAAGATCAGTACATTAAATTTGGAACGTGTTCGTCGCTTGAAAAGTAGACTTGTTGCCTTGACTAGGAGAGTTCAGAAGGTTAGAGATGAAATAGAGCAGCTAATGGATGATGATGGCGATATGGCTGAAATGTACCTCACAGAGAAGAAAAGTCGGATGGAGTCATCATTTTTCGGAGATCATCAATCTATGGGATATAAATCAATTGATGCTGCATCAATTTCTGCCCCAGTTTCTCCTGTTTCTTCACCTCCTGATGCTCGGAGGCTTGATAAATGCTTGAGCATTGCAAGGAGTCGACATGAAAGCATGAAAAGTACAGAAAGTGCTACAAGCAGTATAGAAGAGCTTGAGATGTTGCTGGAAGCTTACTTTGTTGTAATTGACAGCACCTTGAACAAGTTGACATCGTTGAAAGAGTACATTGACGACACAGAAGATTTCATAAACATCCAACTAGACAATGTACGAAATCAGCTGATCCAATTTGAGCTTCTACTCACAACGGCGACATTTGTGGTTGCCATTTTTGGTGTGGTAGCAGGAATATTTGGGATGAACTTTGAAATCCCATTATTTGATGTACCATCTGCATTCAATTGGGTCCTTATAATTACAGGGATTTGTGGGGTCTTGATATTTAGTGCGTTTGTGTGGTTCTTCAAATACAGAAGGCTCATGCCCCTATAG 1404 0.4266 MEGLRKRVLFKNQLNFSLEPTLIMADLKERLLLPPKPASALNLREAVNRPSASGRQPLQGVDVLGLKKRGQGLRSWIRVDTSGNSQVIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLDSYVLHYVMELQRRLTTAGVGEVWQLDNSDMSRRRGSRNVDNSFNNTSPDYLPFEFRALEVALESACTFLDTQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKSRMESSFFGDHQSMGYKSIDAASISAPVSPVSSPPDARRLDKCLSIARSRHESMKSTESATSSIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGIFGMNFEIPLFDVPSAFNWVLIITGICGVLIFSAFVWFFKYRRLMPL 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0712 467 FunFam Magnesium transporter MRS2-1 405 465 - -
Lele42g0712 467 Pfam CorA-like Mg2+ transporter protein 356 455 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Lele42g0712 467 Gene3D Magnesium transport protein CorA, transmembrane region 405 465 - -
Lele42g0712 467 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 44 465 IPR039204 -
Lele42g0712 467 Coils Coil 248 275 - -
Lele42g0712 467 FunFam Magnesium transporter MRS2-1 64 147 - -
Lele42g0712 467 CDD Mrs2_Mfm1p-like 76 464 IPR039204 -
Lele42g0712 467 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 404 457 IPR045863 -
Lele42g0712 467 Gene3D Magnesium transport protein CorA, transmembrane region 154 398 - -
Lele42g0712 467 Gene3D - 63 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0712 Lele-ChrLele42 20173292 20176923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0712 24 467 MRS2 Gene Family AT1G16010 85.169 0.0 751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele42g0712 42 20173292 20176923 Lele43g0672 43 6004495 6007206 hybridization
Lele42g0712 42 20173292 20176923 Lele44g0629 44 4995974 4998625 hybridization