Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0708 ATGCCTACGCCCATCGTTGTCCTCAATGTCTGGTGCATCCAGTCGTCAAGAGATATTGAATTCAAGGAAAACAAGCATTTGCCTGCAGAAATGCAGATGGTAACTGCTGATCCAGAGTTAATTTCTGTTGACCTTTGCGATGATGATGAGTTTCTCGTAATAGCTTGTGATGGAATATGGGATTGCATGTCAAGTCAACATCTTGTGGACTTCATACATGAACAGTTTAGGACAGAAAACGATCTAAAAGTGGTTTGTGAAAGAGTATTGGATTGGTGCTTGGCACCAGCAGCTGGTGGTCTGGGATGTGACAACATGACCATGATCTTGATTCAGTTCAAAAGGCCTTCAAATTCAGGTGCAGATTCTATCATTAACTAG 381 0.4199 MPTPIVVLNVWCIQSSRDIEFKENKHLPAEMQMVTADPELISVDLCDDDEFLVIACDGIWDCMSSQHLVDFIHEQFRTENDLKVVCERVLDWCLAPAAGGLGCDNMTMILIQFKRPSNSGADSIIN 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0708 126 Gene3D - 9 114 IPR036457 -
Lele42g0708 126 SUPERFAMILY PP2C-like 18 115 IPR036457 -
Lele42g0708 126 Pfam Protein phosphatase 2C 13 98 IPR001932 -
Lele42g0708 126 PANTHER PROTEIN PHOSPHATASE 2C 18 112 IPR015655 GO:0004722|GO:0006470
Lele42g0708 126 ProSiteProfiles PPM-type phosphatase domain profile. 1 113 IPR001932 -
Lele42g0708 126 CDD PP2Cc 32 113 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0708 Lele-ChrLele42 20150115 20151934 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0708 18 119 PP2C-type Phosphatase Gene Family AT2G25070 68.932 4.08e-48 155