Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0705 ATGGTTCTCACGAAAATGAAAGAAGTGGCTGAAGCATTTCTGAGTCAGACCATCAAGAACGCGGTGATCACCGTACCTGCTTATTTCAACGATTCACAAAGGCAAGCAACAAAAGATGCTGGAGCCATTGCTGGGCTTAATGTGATGAGAATCATCAACGAGCCCACTGCTGCTGCTATTGCCTATGGTTTGGACAAGAAAGCTTCTAGAACCGGCGAGAAAAACGTGCTTATCTTCGACCTCGGAGGTGGTACTTTTGATGTTTCACTGTTGACAATTGAAGAAGGGATTTTTGAAGTGAAGGCTACTGCTGGTGATACACATTTGGGAGGTGAAGATTTTGATAACAGGCTCGTGAATCACTTCGCGGCTGAGTTCAAGAGGAAGAACAAGAAGGACATAAGTGGCAATGCAAGAGCTCTGAGAAGATTAAGAACTGCTTGTGAGAGAGCAAAGAGGACTCTTTCTTCCACAACACAAACAACAATAGAGATTGATTCTCTTTTTGAAGGTATTGACTTGTATGCGACCATTACAAGGGCGAGATTCGAAGAGCTGAACATGGACTTGTTCAGAAAATGCATGGAACCAGTGGAGAAATGTCTGAGAGACGCGAAAATCGACAAGAGTCAAGTTCACGATGTGATTCCTCTATGTATTGGGAAAGATGGTCTGGCGACTGGTGTAAGATGA 693 0.4387 MVLTKMKEVAEAFLSQTIKNAVITVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYGLDKKASRTGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFAAEFKRKNKKDISGNARALRRLRTACERAKRTLSSTTQTTIEIDSLFEGIDLYATITRARFEELNMDLFRKCMEPVEKCLRDAKIDKSQVHDVIPLCIGKDGLATGVR 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0705 230 PANTHER HEAT SHOCK PROTEIN 70KDA 1 216 IPR013126 GO:0005524|GO:0140662
Lele42g0705 230 Pfam Hsp70 protein 1 216 IPR013126 GO:0005524|GO:0140662
Lele42g0705 230 FunFam Heat shock 70 kDa 110 193 - -
Lele42g0705 230 PRINTS 70kDa heat shock protein signature 84 94 - -
Lele42g0705 230 PRINTS 70kDa heat shock protein signature 21 41 - -
Lele42g0705 230 Gene3D - 2 66 - -
Lele42g0705 230 SUPERFAMILY Actin-like ATPase domain 71 216 IPR043129 -
Lele42g0705 230 FunFam Endoplasmic reticulum chaperone BiP 1 73 - -
Lele42g0705 230 FunFam Heat shock 70 kDa protein 74 140 - -
Lele42g0705 230 Gene3D Actin; Chain A, domain 4 110 193 - -
Lele42g0705 230 SUPERFAMILY Actin-like ATPase domain 1 66 IPR043129 -
Lele42g0705 230 Gene3D - 67 216 - -
Lele42g0705 230 ProSitePatterns Heat shock hsp70 proteins family signature 2. 78 91 IPR018181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0705 Lele-ChrLele42 20108018 20109730 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0705 1 216 Calmodulin-binding Proteins AT5G02500 88.426 1.83e-141 404