Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0699 ATGGCGAAGATGTCACAGAGGAAGGTGAAGAAAGCTGAAAACAGCATCAAGCCTTCGAACACGAAGACGAAACGGACTCGCAAAAGCATTCCCAGAGATTCTCCTCCGCAACGAAGCTCCGTTTATCGAGGCGTCACTAGGCATCGTTGGACGGGTCGATATGAGGCTCATCTCTGGGATAAGAATTGCTGGAATGAATCGCAGAGCAAGAAAGGAAGACAAGGGGCATATGATGATGAAGAAGCTGCAGCACGTGCCTATGACTTGGCAGCATTGAAGTACTGGGGCCAAGACACCATTCTCAATTTTTCTCTCACTACCAATTATGAAGAAGAGCTCAAGGAGATGGAGGGCCAATCAAAAGAGGAATACATTGGATCCTTGAGAAGAAAAAGCAGTGGATTCTCACGAGGAGTCTCAAAATACAGAGGCGTAGCAAGACACCATCACAATGGAAGATGGGAAGCTCGCATTGGCAGAGTCTTCGGCGACAAATATCTGTATCTCGGAACTTACGCTACACAAGAAGAAGCAGCCACAGCATATGATATGGCAGCCATAGAATACAGAGGAGTTAACGCCATTACAAACTTTGACCTCAGCCGTTACCTCAATTGGCCCCGTCCTAAAACGCAAGACTCCAATGAAAACCCTAATCCTGTTAACAGCACCGAGTCTGCTGGATCAAACTCTACTAAGCCTGAACTTGAATTGGGTTTTGTGTCCCACCGGCTGATCAGTTCAAATTCCGACGACACTATGGCGGCCACACCACGATCTGGTGACGGGGCTCCCCCGTCATCGTCTTCATTAGGGCTCCTCTTGCAATCGTCAAAGTTTAAGGAAATGTTGCAGAGGACTTCATCAGCTGGAGACCATCATTATTACACTGCAACTGCAACTGCAACTTCAGAATCAAAGCCTCCTCGTCGTACATTTCCTGAAGATATTCAAACATTCTTTAGCTACACTGAAACTGATGACATCATATTTGGTGATTTGAGCTCAATTACTGATGCTCCAATTTTCCATTGCGAGCTGGATGCTTAG 1050 0.4648 MAKMSQRKVKKAENSIKPSNTKTKRTRKSIPRDSPPQRSSVYRGVTRHRWTGRYEAHLWDKNCWNESQSKKGRQGAYDDEEAAARAYDLAALKYWGQDTILNFSLTTNYEEELKEMEGQSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGDKYLYLGTYATQEEAATAYDMAAIEYRGVNAITNFDLSRYLNWPRPKTQDSNENPNPVNSTESAGSNSTKPELELGFVSHRLISSNSDDTMAATPRSGDGAPPSSSSLGLLLQSSKFKEMLQRTSSAGDHHYYTATATATSESKPPRRTFPEDIQTFFSYTETDDIIFGDLSSITDAPIFHCELDA 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0699 349 Pfam AP2 domain 40 96 IPR001471 GO:0003700|GO:0006355
Lele42g0699 349 Pfam AP2 domain 140 191 IPR001471 GO:0003700|GO:0006355
Lele42g0699 349 SUPERFAMILY DNA-binding domain 140 201 IPR016177 GO:0003677
Lele42g0699 349 SUPERFAMILY DNA-binding domain 40 105 IPR016177 GO:0003677
Lele42g0699 349 MobiDBLite consensus disorder prediction 1 32 - -
Lele42g0699 349 PRINTS Ethylene responsive element binding protein signature 42 53 IPR001471 GO:0003700|GO:0006355
Lele42g0699 349 PRINTS Ethylene responsive element binding protein signature 181 201 IPR001471 GO:0003700|GO:0006355
Lele42g0699 349 FunFam AP2-like ethylene-responsive transcription factor 40 106 - -
Lele42g0699 349 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 19 262 - -
Lele42g0699 349 FunFam AP2-like ethylene-responsive transcription factor 140 201 - -
Lele42g0699 349 Gene3D AP2/ERF domain 41 106 IPR036955 GO:0003700|GO:0006355
Lele42g0699 349 Gene3D AP2/ERF domain 140 201 IPR036955 GO:0003700|GO:0006355
Lele42g0699 349 ProSiteProfiles AP2/ERF domain profile. 41 104 IPR001471 GO:0003700|GO:0006355
Lele42g0699 349 MobiDBLite consensus disorder prediction 207 233 - -
Lele42g0699 349 MobiDBLite consensus disorder prediction 1 44 - -
Lele42g0699 349 CDD AP2 140 201 IPR001471 GO:0003700|GO:0006355
Lele42g0699 349 MobiDBLite consensus disorder prediction 250 271 - -
Lele42g0699 349 ProSiteProfiles AP2/ERF domain profile. 141 199 IPR001471 GO:0003700|GO:0006355
Lele42g0699 349 SMART rav1_2 41 110 IPR001471 GO:0003700|GO:0006355
Lele42g0699 349 SMART rav1_2 141 205 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0699 Lele-ChrLele42 20074049 20077334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0699 37 203 AP2-EREBP Transcription Factor Family AT5G57390 69.412 7.15e-83 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lele42g0699 AP2 1.1e-09 CL0081