Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0697 ATGGAGAAATACGAGAAGTTGGAGAAGGTCGGAGAAGGAACTTATGGGAAGGTATACAAGGCAAAGGAGAAAGCCACCGGGCAGCTGGTGGCTCTGAAGAAGACTCGTCTGGAAATGGACGAGGAGGGAATTCCTCCTACTGCTCTTCGGGAAATCTCCCTCCTTCAGATGCTCTCACAGTCCCTCTACATTGTCCGCCTGCTCTGTGTCGAGCACGTCGACAAGGCTTCAAAGACTGTGCCTGCAGGTAGCCAGCCCAGTACCAAGCCCCTCCTCTACCTCGTCTTTGAGTACCTAGACACTGACCTTAAGAAGTACATTGATTCTCACCGTAAGGGCCCCAACGCCAGGCCTCTTGATCCTTCCCTCATTCAGAGCTTCCTTTTCCAGCTTTGCAAGGGAATTTTTAATCTGCCAATATTTCTTAATGGTCAATTTGTTAGTTTATATATCTTTCACCTAACTGAATTTGGTTCTATAGCTGAAATGGTGAGAAGGCAAGCCCTGTTTCCTGGGGATTCTGAGTTCAAACAGCTCCTTAATATATTCAGGTTAGTTCCTACTTTCCTAAATCCTACATTGACTTCATTTTTATTTATGGTCATCGAAGGTTGTTGGGTACTCCAACTGAGGAGCAATGGCCAGGAGTTACTTCTTTCAGGGACTGGCATGCCTACCCCCTGTGGAAACCACAGGTATAACCCTGCTGAGAGAATCTCTGCAAAGGCAGCACTTGATCATCCCTACTTTGACGGCCTGGACAAGTCTCAATTTTAG 777 0.4698 MEKYEKLEKVGEGTYGKVYKAKEKATGQLVALKKTRLEMDEEGIPPTALREISLLQMLSQSLYIVRLLCVEHVDKASKTVPAGSQPSTKPLLYLVFEYLDTDLKKYIDSHRKGPNARPLDPSLIQSFLFQLCKGIFNLPIFLNGQFVSLYIFHLTEFGSIAEMVRRQALFPGDSEFKQLLNIFRLVPTFLNPTLTSFLFMVIEGCWVLQLRSNGQELLLSGTGMPTPCGNHRYNPAERISAKAALDHPYFDGLDKSQF 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0697 258 Pfam Protein kinase domain 4 135 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0697 258 Gene3D Phosphorylase Kinase; domain 1 1 100 - -
Lele42g0697 258 SUPERFAMILY Protein kinase-like (PK-like) 1 253 IPR011009 -
Lele42g0697 258 FunFam Cyclin-dependent kinase B2,2 1 100 - -
Lele42g0697 258 Gene3D Transferase(Phosphotransferase) domain 1 157 258 - -
Lele42g0697 258 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Lele42g0697 258 SMART serkin_6 4 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0697 258 PANTHER CELL DIVISION PROTEIN KINASE 1 135 - -
Lele42g0697 258 ProSiteProfiles Protein kinase domain profile. 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0697 Lele-ChrLele42 20056227 20057797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0697 1 258 Core Cell Cycle Gene Families AT3G54180 52.516 1.66e-93 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Lele42g0697 Pkinase 1.5e-15 CL0016