Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0696 ATGAAGGATTCGGAGAAAAGGAAGTACCCCATTGGCCCTGAAAATTATGAACTGCTAGAGGAGATTGGCCAAGGGGTCAGTGCTCATGTGCATCGTGCTCGTTGCCTTACTTTTAATGAGATCGTTGCCATAAAAATCCTGGATTTTGAGCGAGAAAACTGCGATCTGAATAATGTTTTTCGTGAAGCACAGACCATGACCTTGGTGGACCACCCTAACGTCCTCAAATCACACTGCTCCTTTGTTAGCGATCATAATCTATGGGTTGTGATGCCATATATGGCTGGTGGTTCGTGTCTTCACATATTGAAAGCCGCTCACCCAGATGGTTTTGAGGAGGTTGTAATAGCAACAATAGTGCGAGAGGTATTGAAGGGTTTAGAGTACCTTCATCATCATGGCCATATACATAGAGATGTTAAAGCCGGGAACATTCTAATTGATGCACGTGGTGCAATCAAGCTGGGGGATTTTGGCGTATCTGCTTGTCTTTTTGATTCAGGTGACAGGCAACGTACAAGGAATACATTTGTTGGGACACCTTGCTGGATGGCACCTGAGGTCATGGAGCAACTGCATGGTTATGACTTCAAAGCAGATATCTGGTCTTTTGGTATAACAGCATTGGAGCTTGCCCATGGTCACGCTCCTTTCTCAAAGTATCCTCCCATGAAGGTACTTCTTATGACATTGCAACATGCGCCGCCTGGCCTTGATTATGAACGCGATAGGAAGTTCTCTAAGTCATTTAAGGATATGATTGCTCGCTGCTTGGTAAAAGATCCTTCAAAACGACCCACTGCAAGCAAGTTGCTGAAGAATTCCTTCTTTAAGCAAGCTCGCTCAAATGATTATATTTTGAGAACGCTTTTGGAGGGGCTGCCTAATTTAGGTGATCGCATCAAGGCCCTAAAGAGGAAAGAAGAAGATATGCTTGCCAAAGAACAAATGCCTGATGGGCAGAAGGAGGAAATATCACAGAATGAATACAAGCGAGGAATTAGCAGCTGGAACTTCAATCTTGATGATATGAAAGCTCAGGCTTCATTGATACAGGATTCTGATGATGCACTATCTGAAATCAATCCAGGAGGGAGTTCAAGTTCTGTATCTACAATTGATGTACAAGAGGAGCAATCACCACGTGCAAACCACTCTCAAATTGCAGATATGGAAGATAACGAAGAGATGAGAAATCAATCCGCTTCCGTGTCAGCAGGAGATTTCACAAAAACTGATTCCAAGGTTAGAAGTGAAAAATCTAATGATGACTCTATCACCAGTTTAAGCCATGAACATCACTTATCACGGGGTGCTTTTCCGTCTCCTGAAGATCATATAGTGGACCATAATTTGAGTGAAAAATGTGATATGGAGAACAGTGGAAGACAAGTGGAGCCTACCCCTTCTTATCACAGAAGATGCTCATCAAGCATCTTACCTGAAGTTACTCATACCCCTACTCGAGGAGAAATAGAGAAGATACCAACTCTGTCCCATAGCATTTCAATTTGCAATGCAACGACGGTACCACAGTTAGGAGAAGCAGCTAATTTGGATGAAACAGATGAGAAAGTAAAGGTACCAGTTGTTCAGCAGAGAGGACGTTTTAAGGTTACATCTGAGAATGTTGAGTTAGAAAAGGTGGCCCCAACTCCTATTCTGCAAAAGAGTCAAAGCATGCAGGTTATTAGCTCACACAATATAACTCCTCTACCTGCTTCAATTTTACCACAGTCATCGACATCCCAGGCTACATCATCAAATCTTTCTGGTTCTGCACTTCACCAATTATTGCATTGTGTGCTGCAAGCAAATATTGAACAAAGGGACGCTATCTTACTTTTAATGAAACATGTAACTGCTGGTGACTTAACAGTTGATGGAGCATCTAACCAAGCATTGGCTTCAGCAATGGAGAAATCTTTGCTTGAAGCATCTCATGAGAGAGAGAGAGAGTTAATTCATGAAATAGTTGAGTTGCACAGGAGGCACCAAAGTGACCAGGAAGAGATTAAAAAATTGAAATCAGAAAACGCTCAGCCTCAGAGTGCTTCACCGTCTCTTGAAGATCATATAGTGGACCATAATTTGAGTGAAAAATATGATATGGAGAATGGTGGAAACCAGGGGGGGCTTACTACTTCTTATCACAAAAGATGCTCATCAAGCTCAAGCATCTTGCCTGAAGTTACTCACTCAAATTGTCAATCCCGCTCGGCCTTGGCTCGGATATCTTTGGATGTGCCTAGTTATGCTGCTCGATTTGGTATTAGATGGTTAGTATATATTGTTGATGTTGAGAAGGAAACTTGA 2316 0.4236 MKDSEKRKYPIGPENYELLEEIGQGVSAHVHRARCLTFNEIVAIKILDFERENCDLNNVFREAQTMTLVDHPNVLKSHCSFVSDHNLWVVMPYMAGGSCLHILKAAHPDGFEEVVIATIVREVLKGLEYLHHHGHIHRDVKAGNILIDARGAIKLGDFGVSACLFDSGDRQRTRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQHAPPGLDYERDRKFSKSFKDMIARCLVKDPSKRPTASKLLKNSFFKQARSNDYILRTLLEGLPNLGDRIKALKRKEEDMLAKEQMPDGQKEEISQNEYKRGISSWNFNLDDMKAQASLIQDSDDALSEINPGGSSSSVSTIDVQEEQSPRANHSQIADMEDNEEMRNQSASVSAGDFTKTDSKVRSEKSNDDSITSLSHEHHLSRGAFPSPEDHIVDHNLSEKCDMENSGRQVEPTPSYHRRCSSSILPEVTHTPTRGEIEKIPTLSHSISICNATTVPQLGEAANLDETDEKVKVPVVQQRGRFKVTSENVELEKVAPTPILQKSQSMQVISSHNITPLPASILPQSSTSQATSSNLSGSALHQLLHCVLQANIEQRDAILLLMKHVTAGDLTVDGASNQALASAMEKSLLEASHERERELIHEIVELHRRHQSDQEEIKKLKSENAQPQSASPSLEDHIVDHNLSEKYDMENGGNQGGLTTSYHKRCSSSSSILPEVTHSNCQSRSALARISLDVPSYAARFGIRWLVYIVDVEKET 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0696 771 Gene3D Phosphorylase Kinase; domain 1 4 92 - -
Lele42g0696 771 MobiDBLite consensus disorder prediction 665 691 - -
Lele42g0696 771 FunFam Serine/threonine-protein kinase BLUS1 5 93 - -
Lele42g0696 771 MobiDBLite consensus disorder prediction 412 445 - -
Lele42g0696 771 FunFam serine/threonine-protein kinase BLUS1 isoform X1 97 330 - -
Lele42g0696 771 Coils Coil 658 678 - -
Lele42g0696 771 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Lele42g0696 771 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 5 676 - -
Lele42g0696 771 Gene3D Transferase(Phosphotransferase) domain 1 97 331 - -
Lele42g0696 771 MobiDBLite consensus disorder prediction 357 387 - -
Lele42g0696 771 Pfam Protein kinase domain 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0696 771 SMART serkin_6 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0696 771 CDD STKc_OSR1_SPAK 14 277 - -
Lele42g0696 771 ProSiteProfiles Protein kinase domain profile. 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0696 771 SUPERFAMILY Protein kinase-like (PK-like) 14 278 IPR011009 -
Lele42g0696 771 MobiDBLite consensus disorder prediction 357 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0696 Lele-ChrLele42 20040777 20050848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0696 5 664 MAP Kinase Kinase Kinase Kinase AT1G79640 60.350 0.0 795
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Lele42g0696 Pkinase 1e-60 CL0016