Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0693 ATGGGCTCTGTAGAGAAGGTAGACCTTGATTTTGAAGAGGAGGTCCCTTTTAGCTCCTCAACAAATCAGGGGAAAGTCCTTGCTTTTCAATATGAGACAAATCATGCGCTTTCTTCCGCAAATTTGGCCAGCTCATCCATCTTCAAGGAAATCGGGAAAAGACCTATCAGGAGCATATACATTGTCTTAATTAAAGCGAAGATCAACATGTTGCTACCTTTTGGTCCCTTAGCCATATTGCTACATTATCTAACAGGAAAGCATGCATGGGTGTTCTTCTTCGCCCTAGTGGGTATTACTCCTTTGGCAGAACGTCTGGGTTATGCTACTGAGCAGCTTGCATGTTTTACAGGACCAACAGTTGGGGGTTTGCTAAATGCCACATTTGGCAATGCAACTGAAATGATCATATCAATTTATGCTTTGAACAATGGGATGATTAGGGTTGTTCAGCAATCTTTACTGGGCTCAATCTTGTCAAATATGCTTCTTGTTCTGGGATGTGCATTCTTTACTGGTGGCATTGTCCACCACCAAAAGGTTCAGGCATCTGCTGTTGTGAATTCTGGGTTGCTATTGATGGCTGTAATGGGAATATTGTTTCCTGCTGTGCTTCACTTTACTCACACAGAGGTTCACTTTGGCAAGTCAGAGGTTTCTCTGTCCAGATTTAGTAGCTGTATAATGCTAACAGCTTATGGTAGCTACCTTTTCTTTCAACTAAAAAGTCAACACAATAGTTACAGTTCACTTGAAGAGGAAGGAGATAGTAATGAAAATTCTGATGAGGAAGAAGAATGTGAATTAACAAAATGGGAGGCAATAGGCTGGCTTGCTATTTTGACAGCATGGGTTTCTATTTTATCTGGATACCTTGTGGATGCCATTCAGGGGACATCTGAGTCATGGAATATGCCAGTGGCATTCATTAGTGTCATATTGCTTCCGATTGTCGGAAATGCTGCAGAGCACGCAAGTGCTATCATGTTTGCCATGAAGGACAAGCTTGATATTACACTTGGAGTTGCTATTGGATCATCTACTCAGATATCTATGTTTGTGATCCCCTTTTGTGTGGTAGTTGGGTGGTGCATGGGGAAACCAATGGACTTGAATTTTCAACTCTTTGAGACTGCTACGCTTTTTATCACAGTGCTGGTTGTCGCATTTATGTTGCAGTTGGAGGCCAATAATGAAGAATATAGAGAGGCTGTGGTAGCTAATAGCTATATGCAGATGGTAAACATTTGCAGTACTTATACTCAGAAAAATTAG 1275 0.4133 MGSVEKVDLDFEEEVPFSSSTNQGKVLAFQYETNHALSSANLASSSIFKEIGKRPIRSIYIVLIKAKINMLLPFGPLAILLHYLTGKHAWVFFFALVGITPLAERLGYATEQLACFTGPTVGGLLNATFGNATEMIISIYALNNGMIRVVQQSLLGSILSNMLLVLGCAFFTGGIVHHQKVQASAVVNSGLLLMAVMGILFPAVLHFTHTEVHFGKSEVSLSRFSSCIMLTAYGSYLFFQLKSQHNSYSSLEEEGDSNENSDEEEECELTKWEAIGWLAILTAWVSILSGYLVDAIQGTSESWNMPVAFISVILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGSSTQISMFVIPFCVVVGWCMGKPMDLNFQLFETATLFITVLVVAFMLQLEANNEEYREAVVANSYMQMVNICSTYTQKN 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0693 424 TIGRFAM caca2: calcium/proton exchanger 62 393 - -
Lele42g0693 424 TIGRFAM cax: calcium/proton exchanger 71 392 IPR004798 GO:0006816|GO:0015369
Lele42g0693 424 Pfam Sodium/calcium exchanger protein 88 241 IPR004837 GO:0016020|GO:0055085
Lele42g0693 424 Pfam Sodium/calcium exchanger protein 275 398 IPR004837 GO:0016020|GO:0055085
Lele42g0693 424 FunFam Vacuolar cation/proton exchanger 262 418 - -
Lele42g0693 424 Gene3D - 264 412 IPR044880 -
Lele42g0693 424 Gene3D - 119 254 IPR044880 -
Lele42g0693 424 FunFam Vacuolar cation/proton exchanger 119 254 - -
Lele42g0693 424 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 33 396 IPR004713 GO:0006812|GO:0008324|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0693 Lele-ChrLele42 20006653 20011468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0693 6 398 Antiporters AT3G13320 67.647 0.0 530