Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0667 ATGGATGATGACATGGAGAGCGGTAGTTTAGGGCCATATCAGGACAAACCTAGAACATTTCCCAACATGCGTAGTAAAGCCTACACCCCGCTGATATTTCGTATTCTACTTGGTATAAATGTTCGTGTCCTGTTCATACTTTTGTTTCTGGGTCTTGGAGCTATCTTCTACATTGGAGCAAGCACATCTCCAATCATTGTGTTTGTCTTCTCTGTTTGTATTCTCAGCTTCCTTGTGTCCATATATCTTACAAAGTGGGTGCTTGCAAAGGATGAGGGCCCTCCTGAAATGGTTCAGATATCAGACGCTATACGAGATGGAGCTGAAGGATTTTTCAGGACCCAATATGGCTGTATATCCAAGATGGCAATGTTGCTTGCTCTGGTGATCCTTTGCATATATTTGTTCCGTAGTAAAACTCCTCAACAGGAATCTTCTGGCCTGGGAAGGTCATCTTCTGCGTACATCACGGTAGCTGCATTCCTTCTAGGTGCTCTTTGTTCTGGTATTGCGGGATATGTAGGAATGTGGGTGTCAGTCCGTGCCAATGTTAGGGTTTCTAGTGCTGCAAGACGGTCTGCAAGGGAGGCATTGCAGGTAGCTGTTCGTGCTGGTGGTTTCTCGGCTATTGTTGTTGTTGGTATGGCTGTAATTGGTATAGCAATCCTTTATGCCACATTTTATGTTTGGTTGGGAGTGGACACACCTGGTGGAATGAAGGTTACTGATTTACCTCTTCTTCTTGTTGGATATGGTTTTGGTGCCTCCTTTGTTGCGCTGTTCGCACAGCTGGGTGGTGGAATATACACAAAGGCAGCTGATGTTGGAGCAGACCTTGTTGGAAAAGTGGAGCAGGGGATTCCTGAAGATGACCCTAGGAATCCTGCTGTAATTGCTGACCTGGTTGGAGACAATGTGGGAGATTGTGCTGCTAGAGGTGCTGATCTTTTTGAAAGCATTGCAGCTGAGATAATCAGTGCCATGATACTTGGGGGAACTATGGCACAGCGGTGTAAAATAGAAGATCCTTCTGGCTTCATCTTGTTTCCTCTTGTCGTTCACTCATTTGATCTGGTTGTTTCATCAATTGGAATATTTTCAATTAGGGGCACACGTGAGAGTGGTGTGAAGGCTCCCATTGAGGATCCAATGACAATTCTTCAGAAAGGATATTCTGTTACAATAGTTTTAGCTGTTCTGACATTTGGTCTGTCTACTCGGTGGTTACTTTACACAGAACAAGCTCCATCAGCATGGTTCAATTTTTCCTTGTGTGGGTTGATTGGTATAATCACTGCTTACATTTTTGTCTTCATAACCAAGTATTACACTGACTACAAGCATGAGCCTGTGCGCACATTAGCCCTTTCTAGCTCCACGGGTCATGGGACTAATATAATTGCTGGGGTCAGCTTGGGCCTGGAATCAACTGCTCTTCCTGTCCTTGTCATCAGTGTGTCAATTGTCTCTGCTTTCTGGCTGGGTCACAGCTCTGGACTAGTTGATGAAGCAGGAAACCCAACTGGTGGGCTGTTTGGCACAGCTGTAGCAACAATGGGTATGCTGAGCACTGCTGCTTATGTTCTTACCATGGATATGTTTGGTCCAATTGCTGATAATGCTGGAGGTATTGTAGAGATGAGTCAGCAGCCTGAAAGTGTCCGAGAGATCACTGATATTCTTGACGCAGTTGGAAACACAACCAAAGCTACGACTAAAGGATTTGCCATTGGTTCTGCTGCTCTTGCTTCTTTCCTTTTGTTTAGTGCTTATATGGATGAGGTTGCCGCATTTGCACATGAACCTTTTAAACAGGTTGATATTGCAATTCCAGAAGTTTTCGTTGGTGGGCTGTTGGGTTCGATGCTTATTTATCTGTTCAGTGCTTGGGCTTGTTCTGCTGTTGGCCGGACTGCTCAAGAGGTTGTTAATGAAGTAAGAAGGCAGTTCATTGAGAGGCCTGGCATTATGGAGTATAAGGAGAAACCAGATTATGGTCGATGTGTTGCTATCGTAGCATCTGCATCGCTAAGGGAGATGATAAAACCCGGTGCTCTTGCCATCATTTCACCTATTGTAGTTGGATTTCTGTTCCGAGTTTTGGGTTTCTATACAGGGCAGCCGCTACTTGGGGCTAAAGTTGTGGCTTCCTTTCTAATGTTTGCAACTGTTTCTGGTATTCTGATGGCACTTTTTCTGAACACTGCCGGTGGGGCCTGGGATAATGCGAAGAAGTACATTGAGACTGGAGCTCTTGGAGGCAAGGGTAGTGAGGCACACAAAGCTGCAGTAACCGGAGATACGGTGGGAGACCCGTTCAAAGACACAGCTGGGCCTTCACTTCATGTTGTTATTAAGATGCTTGCAACAATTACACTTGTTATGGCTCCAATCTTCCTGTGA 2403 0.4515 MDDDMESGSLGPYQDKPRTFPNMRSKAYTPLIFRILLGINVRVLFILLFLGLGAIFYIGASTSPIIVFVFSVCILSFLVSIYLTKWVLAKDEGPPEMVQISDAIRDGAEGFFRTQYGCISKMAMLLALVILCIYLFRSKTPQQESSGLGRSSSAYITVAAFLLGALCSGIAGYVGMWVSVRANVRVSSAARRSAREALQVAVRAGGFSAIVVVGMAVIGIAILYATFYVWLGVDTPGGMKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMAQRCKIEDPSGFILFPLVVHSFDLVVSSIGIFSIRGTRESGVKAPIEDPMTILQKGYSVTIVLAVLTFGLSTRWLLYTEQAPSAWFNFSLCGLIGIITAYIFVFITKYYTDYKHEPVRTLALSSSTGHGTNIIAGVSLGLESTALPVLVISVSIVSAFWLGHSSGLVDEAGNPTGGLFGTAVATMGMLSTAAYVLTMDMFGPIADNAGGIVEMSQQPESVREITDILDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVAAFAHEPFKQVDIAIPEVFVGGLLGSMLIYLFSAWACSAVGRTAQEVVNEVRRQFIERPGIMEYKEKPDYGRCVAIVASASLREMIKPGALAIISPIVVGFLFRVLGFYTGQPLLGAKVVASFLMFATVSGILMALFLNTAGGAWDNAKKYIETGALGGKGSEAHKAAVTGDTVGDPFKDTAGPSLHVVIKMLATITLVMAPIFL 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0667 800 PIRSF H+-PPtase 59 800 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Lele42g0667 800 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 63 800 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Lele42g0667 800 Pfam Inorganic H+ pyrophosphatase 74 795 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Lele42g0667 800 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 90 799 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Lele42g0667 800 TIGRFAM V_PPase: V-type H(+)-translocating pyrophosphatase 66 799 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0667 Lele-ChrLele42 19723312 19733048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0667 1 800 Primary Pumps ATPases AT1G16780 87.500 0.0 1446