Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0651 ATGAGTACAAGCTCAACCGGTAACGTTACTGGTAGTGTTGGTGGGGGTGGTGGAAGCTGCAGCGGCAGCGGCAGCGGTGGAGGGCCGTGCGGTGCCTGCAAGTTTCTGAGAAGGAAGTGCTTGCCAGGGTGTATCTTCGCGCCGTACTTTGACTCGGAGCAAGGCGCGACGCACTTTGCGGCGGTGCACAAGGTGTTCGGAGCGAGCAACGTGTCGAAGCTGCTTCTGAATATTCCGGTGCACAAGCGGCTGGACGCGGTGGTGACGATTTGCTTCGAGGCTCAGGCACGGCTGAGAGATCCTGTGTATGGATGTGTCGCCAACATCTTCGCTCTTCAGCAACAGGTTGTGAATCTACAAGCAGAACTTTCTTACTTGCAAGCTCACCTTGCTACGTTAGAGTTGCCCCAACCACCACCTCCACCGCTGCCACAAGCGCCGCCGGCATTGACAACTCTCTCGATTGGCAACATCTCGTCCGACGTAGCCTCTTCTCTCCCGCTGACATATGATTTGTCTTCTCTCTTCGATCCTATGGTCCAAACTTATTGGGCCCCAACACAACGGCCCATATTGGACCAGCGCCAATATGGGCCTACTGGCTTGCCATCAGTAGTTAATGCTAGCTGCGGCGGAGGCGGAGGCAGCGGCAGCGATCTTCATGCCCTAGCGAGAGAACTGATCAACAGATATGGGTCACCTCCACCATCTTCATCAGCACCCATGTCTTGCTCAAAAGCGTCCTCTTCATCTCCATCACTTTCCAAATGA 771 0.5512 MSTSSTGNVTGSVGGGGGSCSGSGSGGGPCGACKFLRRKCLPGCIFAPYFDSEQGATHFAAVHKVFGASNVSKLLLNIPVHKRLDAVVTICFEAQARLRDPVYGCVANIFALQQQVVNLQAELSYLQAHLATLELPQPPPPPLPQAPPALTTLSIGNISSDVASSLPLTYDLSSLFDPMVQTYWAPTQRPILDQRQYGPTGLPSVVNASCGGGGGSGSDLHALARELINRYGSPPPSSSAPMSCSKASSSSPSLSK 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0651 256 Pfam Lateral organ boundaries (LOB) domain 29 127 IPR004883 -
Lele42g0651 256 ProSiteProfiles LOB domain profile. 28 130 IPR004883 -
Lele42g0651 256 MobiDBLite consensus disorder prediction 232 256 - -
Lele42g0651 256 MobiDBLite consensus disorder prediction 229 256 - -
Lele42g0651 256 PANTHER LOB DOMAIN CONTAINING PROTEIN 27 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0651 Lele-ChrLele42 19484566 19490818 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0651 32 239 AS2 family AT2G45420 63.426 5.13e-81 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele42g0651 LOB 3.2e-37 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele42g0651 42 19484566 19490818 Lele43g0734 43 6700711 6705485 hybridization
Lele42g0651 42 19484566 19490818 Lele44g0690 44 5798158 5803380 hybridization