Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0650 ATGGATTGTGGGTATAGTAAGAATAATAACAATGGTTATGCTGGTGATGGGGATGGTGATCGTGGTGGTCAGAGAGGGCCTTGTGGGGCGTGCAAGTTCCTGAGAAGAAAGTGCGTGAAGGGTTGTGTATTTGCACCCTACTTCGACTCCGATCAAGGCACGGCACACTTCGCCGCGGTGCACAAGGTGTTTGGAGCCAGCAACGCCGCCAAGCTTCTGCTGAGAATCCCTCCTCACCACCGTCTCGACGCCGTCCTCACTCTCTCCTACGAGGCTCTCTCTAGGGCTCGAGATCCCGTCTATGGCTGCGTCGCCCACATCTTCGCCCTTCAACAACAGGTGATGAACATGCAGGCAGAGTTAGCTTATGTGCAAGCTCGTCTTTCGACGTTGCAGCGTCTCCCGGCGGCGTTGGCGGTTGCAACTCTTCCTCAACCAGAAACATCTTCATCTTCAAACAATGACTTTCCCTTTGATCCAACTAGTGTACTTCATCAATTGACAACTTTTCCCAACCCTTGCGATCTTCAACATGATGGGGATCTTCAAGCTTTAGCCAGAGATTTTGTATCAAGAGTGAAAGAGGAGAAGAAAACGATCTAA 603 0.5075 MDCGYSKNNNNGYAGDGDGDRGGQRGPCGACKFLRRKCVKGCVFAPYFDSDQGTAHFAAVHKVFGASNAAKLLLRIPPHHRLDAVLTLSYEALSRARDPVYGCVAHIFALQQQVMNMQAELAYVQARLSTLQRLPAALAVATLPQPETSSSSNNDFPFDPTSVLHQLTTFPNPCDLQHDGDLQALARDFVSRVKEEKKTI 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0650 200 Pfam Lateral organ boundaries (LOB) domain 27 125 IPR004883 -
Lele42g0650 200 PANTHER LOB DOMAIN CONTAINING PROTEIN 24 141 - -
Lele42g0650 200 ProSiteProfiles LOB domain profile. 26 128 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0650 Lele-ChrLele42 19464970 19469785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0650 30 192 AS2 family AT2G45410 61.350 1.52e-64 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele42g0650 LOB 4.5e-36 No_clan