Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0649 ATGGAAGCGAGAGAAGGAATTAGTTCAGGGGTTACGGTAATTGGAGCAGAAGCTCCATCAGCCTATCATGTGGCACCAAGAACTGAAGCTCCGAGTCAGAATCAAGTTCCTGAAGTACCAGCAGCACCAAATGTTGGTGCTTCACCAGTGAGTGTGGGACTGGATGGAACAGCAGTCAAGAAGAAACGAGGTAGACCAAGGAAGTATGGTCCCGACGGTTCTGTGGCTATGGCATTGTCACCTTTGCCAATTTCGTCTTCAGCTCCACTTGCCAACGACTTCTCATCTGGGGGGAAGCGGGGCAAATCGGCAGGAATGGAGTACAAGAAATATAAGAAACTCGGATTGGATCATTTGGGTGATTTGAATGCCTGCTCCCTTGGCACAAACTTCATGCCTCATATCATCACAGTAAATACTGGCGAGGATATTACAATGAAGGTTATATCTTTTTCTCAACAAGGACCCCGGGCAATATGCATCCTCTCTGCTACTGGTGTGATTTCGAATGTTACCCTACGTCAGCCTGATTCTTCAGGGGGTACTTTGACCTATGAGGGTCGCTTTGAGATCCTATCGCTGTCTGGATCATTCATGCCTACTGAGAACCAAGGAACAAGAAGCAGGTCAGGTGGAATGAGTGTCTCTTTGGCAAGCCCTGATGGTCGTGTTGTAGGTGGCGGAGTTGCTGGTCTTCTTATTGCTGCCAGTCCTGTGCAGGTGGTGGTGGGAAGTTTTCTACCAAGCAATCAGCAAGACCCGAAACCAAAGAAGTCCAAATCTGATTATGCACCACTTGCTACTGTTACCCCGCCAACCGTCCCTGTTTCTTCTGCACCACCCTCAACTAATGCTGAAAAAGAAGACGGCTTGGGCGGTGGGGGACATGTCCTGCAAAATTCTGGAAACCTGAATTCCAACATGACATCTCCTTCAGCATTCCGACGAGAAAACTGGGTGAGCATGCACTCTATGCCAGATTTGAGACAGTCAGCCACGGACATTAACATCTCCCTGCCAGATAGTTAA 1029 0.4849 MEAREGISSGVTVIGAEAPSAYHVAPRTEAPSQNQVPEVPAAPNVGASPVSVGLDGTAVKKKRGRPRKYGPDGSVAMALSPLPISSSAPLANDFSSGGKRGKSAGMEYKKYKKLGLDHLGDLNACSLGTNFMPHIITVNTGEDITMKVISFSQQGPRAICILSATGVISNVTLRQPDSSGGTLTYEGRFEILSLSGSFMPTENQGTRSRSGGMSVSLASPDGRVVGGGVAGLLIAASPVQVVVGSFLPSNQQDPKPKKSKSDYAPLATVTPPTVPVSSAPPSTNAEKEDGLGGGGHVLQNSGNLNSNMTSPSAFRRENWVSMHSMPDLRQSATDINISLPDS 342
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0649 342 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 31 310 IPR039605 GO:0003680
Lele42g0649 342 MobiDBLite consensus disorder prediction 22 74 - -
Lele42g0649 342 MobiDBLite consensus disorder prediction 247 310 - -
Lele42g0649 342 FunFam AT-hook motif nuclear-localized protein 1-like 133 263 - -
Lele42g0649 342 Gene3D - 133 262 - -
Lele42g0649 342 CDD DUF296 133 246 IPR005175 -
Lele42g0649 342 ProSiteProfiles PPC domain profile profile. 128 269 IPR005175 -
Lele42g0649 342 SUPERFAMILY AF0104/ALDC/Ptd012-like 131 249 - -
Lele42g0649 342 Pfam Plants and Prokaryotes Conserved (PCC) domain 133 246 IPR005175 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele42g0649 Lele-ChrLele42 19447509 19452282 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0649 10 279 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 55.776 1.29e-99 296