Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0643 ATGGAAGAGAGCAAAGGAAGAGTATGTGTTACGGGTGGCAATGGCTTTATTGGTTCTTGGATCATCAAGAGACTTCTTGAGGATGGTTACTCTGTTAATGCCACCGTTAGATCTCACCCTGATTTGAGCTTCCTCTCAAATCTACCAGGGGCATCTGAAAAGCTTCAAATATATAAGAATGCAGACCTAAACAATCCAGAAAGTTTCACAGAAGCCATTGAAGGGTGCGTGGGAGTGTTCCATGTGGCTACCCCACTGGATCTTGAAGACCCTGAGGAGGTATTGACAAAAAGATCCATTGATGGAGCACTAGGCATTTTAAAGGCATGCAAGGCTTCAAAAACAGTGAAGAGAGTTGTTTACACATCAAGTGGTGTAACTGTTTCATTTGATGGCAAAGAAGATGATAATAATGAAGTAGTGAAGGATGAGAGGTGTTGGAGTGACGTAGATTATCTTAGAAGCTTGAAGACAACATTGGGATGGTGGTCTTATGCTGTTTGTAAGACATTGACAGAGAAGGCAATGCTTGAATTTGGAGAAGACAATGGATTAGATGTTTTAACTTTGCTTCCCACTCATGTTGTTGGACCCTTCATTTGTCCTAAGCTTCATGGCTCTCATCGTACTTCCCTCGATTTGGCATTCGGTGGAGGGGACCCAGGGGCTTATCTACAAACACCAGCAGTGCATGTGGATGACCTGGCAAGAGCACACATATTTCTGCTAGAACATCCCAATCCAAAAGGAAGGTATATTTGTTCAGCATGTTTGGTAACTATTGAAGACATCTATGAAATTCTCTCTTTAAAATATCCAGAATTTCAAATACCACCCAGAGACTATTTGAAGGAAATGAAAGGCCCCAAATTTTCAGCTCCATCATCACAGAAGCTCATAGACGCTGGATTTGCGTTCAAGTATGGGGTTGAGGAAATAATTGTGGATTCAATTGAGAGCTGCAAAAAAATGGGTTATTTAACCTCATATTCTGAATTTGAAATCAAGTATGGGCTGGAAGACATGTTTGTGGAAGCAATTGAAGCTTCCAAGAAATATCTTTGCTATCTTCTGTTTCTTCTGCGAATGGAAGAGGGAAAAGGAAGAGTCTGTGTTACCGGTGGCACTGGCTTTATTGGCTCCTGGATAATCAAGAGACTTCTTGAGGATGATTACTCTGTTAATACCACCGTTAGATCTCACCCTGAACACAAGAAAGATGTTAGCTTCCTCACAAATCTACCAGGAGCATCTCAAAAGCTACAAATTCTAAATGCAGACCTCAACAATCCAGAAAGTTTCAAGGATGCCATTGAAGGATGCATTGGGTTGTTCCACGTAGCAAGCCCAATGGATTTTAAAAAGAATGAACCTGAAGACATCGTAACTAAAAGATCCATTGATGGAGCATTAGGGATTCTGAAAGCATGCCTCACTTCAAAAACTGTGAAGAGAGTTATATACACATCAAGTGCATCAGCTAGTTCTTTCAACAATATTGGCAAAGAAGAAGAAGATGATGAAGTGAAGGATGAGAGTTCATGGAGTGATGTAGATTATCTTAGAAGTTCAAAGACATTTGGATTGTGGTCTTATGCAATTTCTAAGACACTTACTGAGAAAGCAGTGCTTGAATTTGGAGAGCAAAATGGATTAGATGTTGTGACTTTGATTCCAACTTTTGTTGTTGGACCCTTCATTTGTCCAAACCTTCCTGGTTCTATTCTTTCTTCACTCTACTTCGCATTTGGTGACAAGGAACCAATTGGTTATGTGCAAACACCAATGGTACATGTGGAAGATGTGGCAAGAGCACAAATATTTCTGCTTGAACATCCCAATCCAAAAGGCAGATACAATTGTTCAGCATGCTTTGCAACTCTTGAGAAGGTGTTTCAAGTTATTTCTGTTAAATATCCTGAATTTCAGGCACCAAGCATAGATTCCTTGAGAGAAAGGAATGAGATGAAGTTCCCAGATCTGTCATCAAAGAAGCTCATGGATGCTGGTTTTGAGTTCAAGTTTGGACTTGAGGAAATGTTGTATGATGCAATTGCCTGCTGCAAAGAAAAGGTCATTGATTGGTGGTATGAAAATGCTCAAGCATTCGATTGGGACCATGATGGCTTCGGAATTTACCTGCTTAAGATCTCTGAGGATATGTTTGACTGGCAAGTTCTTCCGAGCAACAATGAAAGCTTTGCTAGGAACCTTTTTGGCAGCAATGCTCATTTCATCTCTATCCCTTCACAGGGCCCTCTCTTTTTCACAGCTGAAGCTCTCACTCCCAATTCCAAATGGTTTGCGGTCTTCTTAGCCAAAGACTCATCTCTGTCGGATAATGTGTGCCCAGGAATGTTTCGATCTCTGTCGGTCTTCTTTCAGGAATGTTTCAGGCTATGTTCCAGTCAAACAGAATCTCGCTCCCAGAGGACTTTATGGATGAGTCACCTTCCAAGATAG 2463 0.4105 MEESKGRVCVTGGNGFIGSWIIKRLLEDGYSVNATVRSHPDLSFLSNLPGASEKLQIYKNADLNNPESFTEAIEGCVGVFHVATPLDLEDPEEVLTKRSIDGALGILKACKASKTVKRVVYTSSGVTVSFDGKEDDNNEVVKDERCWSDVDYLRSLKTTLGWWSYAVCKTLTEKAMLEFGEDNGLDVLTLLPTHVVGPFICPKLHGSHRTSLDLAFGGGDPGAYLQTPAVHVDDLARAHIFLLEHPNPKGRYICSACLVTIEDIYEILSLKYPEFQIPPRDYLKEMKGPKFSAPSSQKLIDAGFAFKYGVEEIIVDSIESCKKMGYLTSYSEFEIKYGLEDMFVEAIEASKKYLCYLLFLLRMEEGKGRVCVTGGTGFIGSWIIKRLLEDDYSVNTTVRSHPEHKKDVSFLTNLPGASQKLQILNADLNNPESFKDAIEGCIGLFHVASPMDFKKNEPEDIVTKRSIDGALGILKACLTSKTVKRVIYTSSASASSFNNIGKEEEDDEVKDESSWSDVDYLRSSKTFGLWSYAISKTLTEKAVLEFGEQNGLDVVTLIPTFVVGPFICPNLPGSILSSLYFAFGDKEPIGYVQTPMVHVEDVARAQIFLLEHPNPKGRYNCSACFATLEKVFQVISVKYPEFQAPSIDSLRERNEMKFPDLSSKKLMDAGFEFKFGLEEMLYDAIACCKEKVIDWWYENAQAFDWDHDGFGIYLLKISEDMFDWQVLPSNNESFARNLFGSNAHFISIPSQGPLFFTAEALTPNSKWFAVFLAKDSSLSDNVCPGMFRSLSVFFQECFRLCSSQTESRSQRTLWMSHLPR 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0643 820 Gene3D - 367 693 - -
Lele42g0643 820 Gene3D - 5 327 - -
Lele42g0643 820 FunFam Dihydroflavonol reductase 5 329 - -
Lele42g0643 820 CDD FR_SDR_e 8 304 - -
Lele42g0643 820 FunFam Dihydroflavonol reductase 367 694 - -
Lele42g0643 820 Pfam NAD dependent epimerase/dehydratase family 8 248 IPR001509 -
Lele42g0643 820 Pfam NAD dependent epimerase/dehydratase family 370 620 IPR001509 -
Lele42g0643 820 CDD FR_SDR_e 370 671 - -
Lele42g0643 820 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 5 317 - -
Lele42g0643 820 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 324 IPR036291 -
Lele42g0643 820 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 367 689 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0643 Lele-ChrLele42 19406348 19414620 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0643 366 691 Monolignol Biosynthesis Gene Families AT2G02400 34.251 6.82e-50 176