Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0615 ATGTTTCACACCAATCACTCCCATGAATATCATCATCATCGTCAGCAGCACGACCCCAACCTCTCCTCATCTCCATCTCTCAAATCCTTCCCTTCATTACCACCCCAACACTTTCAAACTCTGAATGGAGGTGATGATGATTTGTCGGATGATGGTTCGGTGCAGATAGGGGAGAAGAAGAAGAGGCTGAAGATGGAGCAGGTTAAGGCACTCGAGAAGAGCTTTGAGGTTGGGAACAAGCTTGAGCCAGAGAGGAAACTGGAGCTGGCTAAGGCTTTGGGTCTGCAGCCACGTCAGATCGCCATTTGGTTTCAGAACAGGAGAGCCCGATGGAAGACCAAGAACCTCGAGAAAGAATACGAATCCCTCAAGAAACAGTTCGAAGCTCTCAAGGCATGGCTTAGGCGGTGA 411 0.4939 MFHTNHSHEYHHHRQQHDPNLSSSPSLKSFPSLPPQHFQTLNGGDDDLSDDGSVQIGEKKKRLKMEQVKALEKSFEVGNKLEPERKLELAKALGLQPRQIAIWFQNRRARWKTKNLEKEYESLKKQFEALKAWLRR 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0615 136 CDD homeodomain 59 115 IPR001356 GO:0003677
Lele42g0615 136 MobiDBLite consensus disorder prediction 1 62 - -
Lele42g0615 136 MobiDBLite consensus disorder prediction 1 18 - -
Lele42g0615 136 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 47 132 IPR045224 GO:0003700
Lele42g0615 136 FunFam Homeobox-leucine zipper protein ATHB-13 50 118 - -
Lele42g0615 136 Coils Coil 106 133 - -
Lele42g0615 136 ProSiteProfiles 'Homeobox' domain profile. 54 114 IPR001356 GO:0003677
Lele42g0615 136 SMART HOX_1 57 118 IPR001356 GO:0003677
Lele42g0615 136 SUPERFAMILY Homeodomain-like 44 116 IPR009057 -
Lele42g0615 136 ProSitePatterns 'Homeobox' domain signature. 89 112 IPR017970 GO:0000981|GO:0006355
Lele42g0615 136 MobiDBLite consensus disorder prediction 19 43 - -
Lele42g0615 136 Gene3D - 53 123 - -
Lele42g0615 136 PRINTS Lambda-repressor HTH signature 94 110 IPR000047 GO:0003677
Lele42g0615 136 PRINTS Lambda-repressor HTH signature 85 94 IPR000047 GO:0003677
Lele42g0615 136 Pfam Homeodomain 59 112 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0615 Lele-ChrLele42 18977899 18978408 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0615 11 132 Homeobox Transcription Factor Family AT5G15150 62.602 2.47e-45 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Lele42g0615 Homeodomain 1.5e-16 CL0123