Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0611 ATGGGAGGTGGAGGGGAACAGACGGACAACAACAGAAATCCTGTCATGCTTACTGATGAATGCCAAAAAACGGAAGCTATAAAACAGAAGAATAAATCTTTTTCTTACTCTGAGATTCTTCACATCACCCACAACTTTGAAACTGCTATTGGAGAAGGAGGGTTTGGGAAGGTTTACCTGGGAACTTTAGAAGATGATACAAAGGTTGCTGTTAAGTTACTTTCTCCATCTTCAAGGCAAGGCTATAAGGAATTTCTGTCAGAGGCTCAACTCTTAACAGTTATTCATCACAGAAACCTGGTTTCACTTATTGGCTTCTGCGATGAAAACGAGTTCAAAGCATTGATCTATGAATATATGGATCTCGGAGACCTTAGAGGACTATTGTCAGGGAAAAACACAAAAGTTTTAATGTGGAATGAGAGACTTCAAGTTGCTATAGATGCAGCCAAAGCTGGTACACCTGGTTATATTGATCCTGAATTTCAAAGGTCCGGAAAGCTAAATAAACAAAGTGACATGTACAGTTTTGGGATGATTCTTCTTCAACTAATAACAGGCCGTCCCCCAATAAGAAGAGAAGTTGAGGATATTTGCTTTATTATTGATTGGATCCATCCAAAAATAGAGTGTGTGGATATCCAAGGCATTGTTGATGTTCGGTTGAGAGGTGAATTCCATGTTGGTTGTGCATGGAAAGCTGTTGAGACAGCAATGTCATGCATTGCAGCACAGTCCACCCATAGGCCAGACATCAGTTATGTGTTGAATGAACTGAAGGAATGTTTAGCTATGGAGACGGGTCAATATGCCAATTCAAATGCTATACAAAGCCATCCAATCAATCATTCTGGTGGGAATCTTGATTCAATCACTACCCTCTCAGCTAGGTAG 894 0.4027 MGGGGEQTDNNRNPVMLTDECQKTEAIKQKNKSFSYSEILHITHNFETAIGEGGFGKVYLGTLEDDTKVAVKLLSPSSRQGYKEFLSEAQLLTVIHHRNLVSLIGFCDENEFKALIYEYMDLGDLRGLLSGKNTKVLMWNERLQVAIDAAKAGTPGYIDPEFQRSGKLNKQSDMYSFGMILLQLITGRPPIRREVEDICFIIDWIHPKIECVDIQGIVDVRLRGEFHVGCAWKAVETAMSCIAAQSTHRPDISYVLNELKECLAMETGQYANSNAIQSHPINHSGGNLDSITTLSAR 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0611 297 PANTHER OS07G0107800 PROTEIN-RELATED 29 263 - -
Lele42g0611 297 Gene3D Transferase(Phosphotransferase) domain 1 20 151 - -
Lele42g0611 297 SUPERFAMILY Protein kinase-like (PK-like) 31 265 IPR011009 -
Lele42g0611 297 FunFam Leucine-rich repeat receptor-like protein kinase 22 119 - -
Lele42g0611 297 Gene3D Transferase(Phosphotransferase) domain 1 152 282 - -
Lele42g0611 297 ProSiteProfiles Protein kinase domain profile. 44 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0611 297 Pfam Protein tyrosine and serine/threonine kinase 46 152 IPR001245 GO:0004672|GO:0006468
Lele42g0611 297 ProSitePatterns Protein kinases ATP-binding region signature. 50 72 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0611 Lele-ChrLele42 18929483 18935165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0611 25 274 Receptor kinase-like Gene Family AT3G46400 40.328 6.93e-64 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele42g0611 PK_Tyr_Ser-Thr 3.1e-20 CL0016