Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0607 ATGAAGGCCATGCCCTTGCCTTTTGAGGAGTTTCAAGGGAAGGGGGTGTTCGAGTTTTCTTCTTTTGCTTCTTCAGATTCGTTTCCTCTGCATCTTTTGAATCATCAACCACCACCGGAAAAGTGGACCGGCGGCGAGAAAATTTGCTATGTGGGCACTGAGCCCACCTCTGTTCTTGACGCCAGAAGAAGTCCAAGCCCTCCGACTTCCTCCTCAACAATGGCCTCTCGTGGAAGCAATAGCGCTGCCAGCAAGGGCGGCGGTGGCGATGGAAGCTGCTCAACCAATAGCACCACCAACGGCGCAGCGGCGACGGCCTCAGAAAACCCATCTCAGGCGGCCTTAGACACGTCCAGCGCAGAGAAATGTGCTCTGCCGGTGGAGGGTTGGGAGGGCGTGTTGTCTGAATCCCCAGGTCAAGATCAGTCTATTCTCACACTAATTATGGGCGATATCGAAGATCCATCTTCAGGATTGAACAATATCTTGCAGAGCAGTGGAGTTGGGTCTCAAATGGTGGATTTCAATGGAGATTTTGGGGTTGTAGATCAACAAGGGTTTGAGCTTGAACCTGTTACTTGTGGGAGTATGATGAGTCATAACACTACAGAACCCATTTTCTCTGCTTCAGGAACCAATCCTCTTATGTTGTCTTCTTCTCCATTGGTGTTCAATTCTCAGCCTCAAGTAATTTCTACAGTTGAAGACAAGTTAAACCGAAATCAAGTTCAATTCTCAGAGAATCCATCTTTCTTTATGCCATTGACATACCCAAACTTGCAGGAGCAGCAAGTGTTTTCGCATCCTCAAGCGAAACGGCTTCTTTGTGACACAATTGGGCAAGGCTATCTTCAGGTTCCAAAGGGTCCTCCATTGGATTCTGGGCAGGAGTTATTTGCTCGGAGGCCGCCGCAATGGCAGCTTCCTTCGAACCCTCGACATGTGCATCAATGGCAATCCTTACTTGAGCCACCAATGAAACAGCAGAAGGTGAGCTCTTCAGGTGATGATTTCACAACTCAACAGCTACAGAAGACTATAATTGACCTGATTTTCAAGGCTGCAGAGCATATTGAAGCCGGTAACCCGGTAAATGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCCCCTATTGGTAAGCCTTTTCAGAGGGCTGCTTTCTATATGAAGGAAGCCTTGCAGTTATTGCTTCATTCAAGTGGGCAAAGTTTATTGGCTTTCTCACCCATTAGTTTCATATTCAAAATTGGGGCTTATAAGTCATTCTCTGAGATATCTCCGGTTCTTCAATTCGCTAATTTTACTTGTAATCAAGCCCTCATTGAAGCTTTGGAGAGGTTTGATAGGATTCACATTATTGATTTTGATATCGGGTTTGGAGTGCAATGGGCTTCTTTTATGCAAGAGCTGGCCTTGAGAAATGGTGGTGCACCTTCTTTGAAAGTTACTGCTATTGTATCTCCATCTACCTGTGATGAAATTGAGCTCAGTTTTACACGAGAAAGCTTGAAGCAATACGCCAAAGAGATCAATATGTCCTTTGAGCTCAATGTTATGAACATTGAATCATTAAGCCCTGCATCCTGGCCCCTTCCTGGTCGATTCTCTGATACAGAAGCAATTGCTGTGAATTTGCCAGTTTCTTGTTTCTCGAATTACCCTTCGTCCTTTCCTTTGGCCCTTGGCTTTGTGAAGCAGCTCATGCCAAAAATTGTGGTCACTTTGGATAGGAATTGTGATCGAATTGATGTCCCGTTCCCCCACAACTTAATACATGCTCTTCAATCTTACTCGGCCTTGCTTGAATCATTGGATGCTGTGAATGTGAACCTTGACGTCCTCCAGAAAATTGAGAGGCACTTCATCCAACCGGCCATTGAGAAGATCATTTTGGGTTTCCAACATGGTAGAGAAAAGCTACATCCATGGAAGAACCTGCTTCTTTCATCTGGGTTCTCCCCATCCTCATTCAGTAACTCTACAGAGGCTCAAGCAGAATGCCTGGTGCAGAGGGCACCTGTGAGGGGATTCCAAGTGGATAGGAAGCACTCTTCTCTTACTCTATGCTGGCAGAGGAAGGAACTCATCTCTGTTTCATCTTGGAGATGCTGA 2118 0.4622 MKAMPLPFEEFQGKGVFEFSSFASSDSFPLHLLNHQPPPEKWTGGEKICYVGTEPTSVLDARRSPSPPTSSSTMASRGSNSAASKGGGGDGSCSTNSTTNGAAATASENPSQAALDTSSAEKCALPVEGWEGVLSESPGQDQSILTLIMGDIEDPSSGLNNILQSSGVGSQMVDFNGDFGVVDQQGFELEPVTCGSMMSHNTTEPIFSASGTNPLMLSSSPLVFNSQPQVISTVEDKLNRNQVQFSENPSFFMPLTYPNLQEQQVFSHPQAKRLLCDTIGQGYLQVPKGPPLDSGQELFARRPPQWQLPSNPRHVHQWQSLLEPPMKQQKVSSSGDDFTTQQLQKTIIDLIFKAAEHIEAGNPVNAQGILARLNHQLSPIGKPFQRAAFYMKEALQLLLHSSGQSLLAFSPISFIFKIGAYKSFSEISPVLQFANFTCNQALIEALERFDRIHIIDFDIGFGVQWASFMQELALRNGGAPSLKVTAIVSPSTCDEIELSFTRESLKQYAKEINMSFELNVMNIESLSPASWPLPGRFSDTEAIAVNLPVSCFSNYPSSFPLALGFVKQLMPKIVVTLDRNCDRIDVPFPHNLIHALQSYSALLESLDAVNVNLDVLQKIERHFIQPAIEKIILGFQHGREKLHPWKNLLLSSGFSPSSFSNSTEAQAECLVQRAPVRGFQVDRKHSSLTLCWQRKELISVSSWRC 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0607 705 Pfam GRAS domain family 348 704 IPR005202 -
Lele42g0607 705 ProSiteProfiles GRAS family profile. 338 704 IPR005202 -
Lele42g0607 705 MobiDBLite consensus disorder prediction 55 120 - -
Lele42g0607 705 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 315 700 IPR005202 -
Lele42g0607 705 MobiDBLite consensus disorder prediction 59 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0607 Lele-ChrLele42 18808763 18810880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0607 347 705 GRAS Transcription Factor Family AT4G00150 56.906 2.06e-132 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele42g0607 GRAS 2.7e-90 CL0063