Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0595 ATGGATCCGTTTAGAGGACAAGGAGGAATTCAGATGCTGTTAACTGCAGAACAAGAAGCTCAACACATTGTTTCCAATGCAAGAAGCTTGAGAACTCAAAGATTGAAGCAGGCAAAAGAGGAAGCTGAGAGAGAAGCAGCTATGTACAAATCCCACTTGGAAAATGAATACCAAAAGAGTCTCTCAGAGAGTAGTGGGAACTCTGGATCAAATGTGAAAAGACTTGAAGAAGAGACTGAATTTAAGATCAACAATCTAAATGCATCGGCTTCAAAGGTTTCTGCAGAAATTGTTGACATGCTTCTCAACAATGTCACTTCTATCAAAGTGTAA 333 0.3934 MDPFRGQGGIQMLLTAEQEAQHIVSNARSLRTQRLKQAKEEAEREAAMYKSHLENEYQKSLSESSGNSGSNVKRLEEETEFKINNLNASASKVSAEIVDMLLNNVTSIKV 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0595 110 SUPERFAMILY F1F0 ATP synthase subunit B, membrane domain 11 52 IPR028987 -
Lele42g0595 110 MobiDBLite consensus disorder prediction 58 72 - -
Lele42g0595 110 Pfam Vacuolar (H+)-ATPase G subunit 7 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Lele42g0595 110 TIGRFAM V_ATP_synt_G: V-type ATPase, G subunit 8 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Lele42g0595 110 Gene3D - 3 110 - -
Lele42g0595 110 Coils Coil 32 59 - -
Lele42g0595 110 FunFam V-type proton ATPase subunit G 3 110 - -
Lele42g0595 110 MobiDBLite consensus disorder prediction 55 74 - -
Lele42g0595 110 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 1 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0595 Lele-ChrLele42 18541989 18543118 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0595 8 108 Primary Pumps ATPases(2) AT4G23710 54.455 1.74e-33 110