Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0594 ATGGCTGGGCAATCTGATCCTCACCTCTCCCTGTTTTCAGCTGAAGAGCTTGAATTTGTGGCGGAGGATGACATGGTTGAGATTGTACCCAATCTCAAAATGAATGCTCTCAATCTGATAAGTGGAGATTTTGGTCCATTTGCCCCACAACTTGCTACTCAAGTGCCGTTGTGGTTGGCTGTGGCTTTGAAGAAGAGAGGAAAATGCTCTATTCGCCCTCCTGAATGGATGTCAGTTGATAATCTAACTCAAGTTCTGGAGGCCGAGCGAGAATCTCAGGAAATGTCTGAAAAATTACCATTTCATTATGTAGAAATCTCAAGACTTCTCTTTGATCATGCACGCGAAGACATTCCTGATGTATATATGGTGAGGTCTCTAATTGAAGACATTCGAGATGTAAGATTTCATAAAGTAAGGACTGACTTAGAGGCATTCAATGGTCGCACAATTGCTGTCAAGATTAAGAATTTGTCGGCAATGGAGGTGAATATTGTTCGCCCATTTATTAGAAGAGCTTTGCAGGCATTTTGTAAGCATGATAGTCCTGAGCTGATACCAGACCCAGAGAGAGTGGCTGATAAACGTCCACAATTAGTGAACAATGCTCCAAGAGCAATTGCGACGATGATGATCAACATCTCATCAAATATCATGACATGTGGCTGGCTCTGA 675 0.4252 MAGQSDPHLSLFSAEELEFVAEDDMVEIVPNLKMNALNLISGDFGPFAPQLATQVPLWLAVALKKRGKCSIRPPEWMSVDNLTQVLEAERESQEMSEKLPFHYVEISRLLFDHAREDIPDVYMVRSLIEDIRDVRFHKVRTDLEAFNGRTIAVKIKNLSAMEVNIVRPFIRRALQAFCKHDSPELIPDPERVADKRPQLVNNAPRAIATMMINISSNIMTCGWL 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0594 224 SUPERFAMILY GINS helical bundle-like 73 181 IPR036224 -
Lele42g0594 224 CDD GINS_A_psf2 66 182 - -
Lele42g0594 224 FunFam DNA replication complex GINS protein PSF2 12 77 - -
Lele42g0594 224 FunFam DNA replication complex GINS protein PSF2 78 193 - -
Lele42g0594 224 Pfam GINS complex protein 53 162 IPR021151 -
Lele42g0594 224 Gene3D - 12 77 - -
Lele42g0594 224 SUPERFAMILY PriA/YqbF domain 12 71 - -
Lele42g0594 224 PIRSF GINS_PSF2 2 207 IPR007257 GO:0005634|GO:0006260
Lele42g0594 224 Gene3D - 78 185 - -
Lele42g0594 224 PANTHER DNA REPLICATION COMPLEX GINS PROTEIN PSF2 7 192 IPR007257 GO:0005634|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0594 Lele-ChrLele42 18516277 18527348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0594 1 147 Core DNA Replication Machinery Family AT3G12530 72.789 2.50e-80 235