Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0592 ATGAGTCGCAGGGTGAGGAGAAAGGTCGCAAGAAAAGGAAAAGAGAAGGTGGTCTTGTCAAGTTACCCTGAAATTCAAGATAAGGTTTCGAATTCAGACCCCGAACGTGTTGTTGATTGGAGGGGCTTGCCTGAAGACACAGTAATTCAACTGTTTTCATGTCTTAGTTATCGTGACCGAGCAAGCTTATCATCAACTTGTAGGACATGGAGGCTTCTTGGTAGCTCTCCATGTTTATGGACTTCTCTTGATCTTCGCTCTCACAGGTTTGATGCCACCATGGCATCTTCACTTGCTCCAAGGTGTGTGCATCTTCAGAAGCTTAGATTTCGTGGGGCTGAATCTGCTGATGCGATAATTCATCTTCAAGCTAGGAATTTGCGTGAAATAAGTGGTGACTACTGCAGGAAGATTACTGATGCGACCCTTGCAGTAATTGTGGCCCGGCATGAGTTACTTGAGAGCCTTCAGCTTGGTCCAGATTTCTGTGAAAGAATCAGCAGTGATGCTATAAAAGCAATTGCTCATTGCTGTCCTAGGTTAAGGAAACTTAGACTCTCAGGCATTAGGGATGTAAGTGCTGATGCAATTAATGCATTGGCTAAGAATTGTCAGAATTTGACTGATATTGGATTCATTGACTGTTTGAATGTTGATGAGCTAGCATTGGGAAATGTGTTATCAGTTCGTTTTCTTTCCATTGCGGGGACTTCAAGTATGAATTGGGGTGTAGTTTCTCATCTTTGGCATAAGCTGCCCAACCTTACTGGAATAGATGTTTCAAGAACTGATATTGGTCCATCTACTGTTTCAAGGTTGTTGTCAGCACAGAGATTGAAAGTTTTGTGTGCTCTGAATTGTCCTATACTTGAAGAGGACACCAGCTTGTCCACAAGTAAATACAAAAATAAGCTATTAATTGCCCTTTTTAATGATATTTTTAAAGGACTGGCTTCTTTATTTTTTGACGATACAAAGAATGGCAAGAATGTGTTTTTGGACTGGAGGAGCGTTAAGAACAATAACAAGGACTTAAATGAACTTATGATCTGGCTTGAGTGGATCCTATCCCATACACTTCTGCGATCTGCTGAGAGCTCTCCTCAACAGGGCCTAGAAAATTTCTGGGTTGAACAAGGTGGAGGACTCTTGCTTAGTCTAATGCAGAGCCCACAAGAGGATGTTCAGGAAAGGGCAGCCACAGGTCTTGCAACATTTGTTGTAATTGATGATGAAAATGCTAGCATTGACTGTGGAAGGGCTGAAGCAGTTATGCGTGATGGGGGCATACGCCTACTTCTTGGCTTGGCAAAATCATGGAGGGAGGGGCTTCAGTCTGAGGCAGCTAAGGCCATTGCAAATTTGTCTGTCAATGCCAATGTTGCAAAAGCTGTTGCAGAAGAAGGGGGAATTGATATTCTTGCTGGTTTGGCGAGATCCATGAACAAGCTGGTGGCTGAAGAGGCTGCTGGAGGATTGTGGAATCTCTCTGTTGGCGAAGAGCACAAGGGTGCAATTGCTGTGGCTGGTGGAATACAAGCATTAGTAGATCTTATATTCAAGTGGTCCTCCAGTGGGGATGGAGTTTTGGAACGTGCTGCTGGTGCGCTAGCTAATTTGGCAGCTGATGACAAGTGTAGTACAGAAGTTGCACTGGCTGGTGGTGTACATGCTTTAGTGATGCTTGCGCGTAGCTGCAAATTTGAGGGAGTGCAAGAGCAGGCTGCTCGTGCGTTGGCTAATTTGGCTGCTCATGGAGATAGCAACAGTAACAATGCTGCTGTTGGGCAAGAAGCAGGGGCTCTGGAGGCCCTTGTTCAACTTACACGCTCTCCTCACGAGGGTGTCAGGCAAGAAGCTGCTGGTGCACTTTGGAATTTGTCATTTGATGACAGGAATCGAGAAGCCATTGCTGCAGCTGGTGGAGTTCAGGCCTTGGTTGCTCTTGCACAATCTTGTTCTAACGCCTCCCCTGGACTTCAAGAGAGAGCTGCCGGTGCTCTCTGGGGATTGTCAGTTTCTGAAGCCAATAGTATTGCCTATTCTATTTGTCCAAATAGGCCTTTTGATCAGTGA 2076 0.4513 MSRRVRRKVARKGKEKVVLSSYPEIQDKVSNSDPERVVDWRGLPEDTVIQLFSCLSYRDRASLSSTCRTWRLLGSSPCLWTSLDLRSHRFDATMASSLAPRCVHLQKLRFRGAESADAIIHLQARNLREISGDYCRKITDATLAVIVARHELLESLQLGPDFCERISSDAIKAIAHCCPRLRKLRLSGIRDVSADAINALAKNCQNLTDIGFIDCLNVDELALGNVLSVRFLSIAGTSSMNWGVVSHLWHKLPNLTGIDVSRTDIGPSTVSRLLSAQRLKVLCALNCPILEEDTSLSTSKYKNKLLIALFNDIFKGLASLFFDDTKNGKNVFLDWRSVKNNNKDLNELMIWLEWILSHTLLRSAESSPQQGLENFWVEQGGGLLLSLMQSPQEDVQERAATGLATFVVIDDENASIDCGRAEAVMRDGGIRLLLGLAKSWREGLQSEAAKAIANLSVNANVAKAVAEEGGIDILAGLARSMNKLVAEEAAGGLWNLSVGEEHKGAIAVAGGIQALVDLIFKWSSSGDGVLERAAGALANLAADDKCSTEVALAGGVHALVMLARSCKFEGVQEQAARALANLAAHGDSNSNNAAVGQEAGALEALVQLTRSPHEGVRQEAAGALWNLSFDDRNREAIAAAGGVQALVALAQSCSNASPGLQERAAGALWGLSVSEANSIAYSICPNRPFDQ 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0592 691 SUPERFAMILY ARM repeat 380 680 IPR016024 -
Lele42g0592 691 Pfam F-box-like 41 86 IPR001810 GO:0005515
Lele42g0592 691 FunFam Protein ARABIDILLO 2 354 502 - -
Lele42g0592 691 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 641 677 IPR000225 GO:0005515
Lele42g0592 691 Gene3D - 383 503 IPR011989 -
Lele42g0592 691 Pfam Armadillo/beta-catenin-like repeat 553 584 IPR000225 GO:0005515
Lele42g0592 691 Pfam Armadillo/beta-catenin-like repeat 500 542 IPR000225 GO:0005515
Lele42g0592 691 Pfam Armadillo/beta-catenin-like repeat 463 497 IPR000225 GO:0005515
Lele42g0592 691 Pfam Armadillo/beta-catenin-like repeat 592 628 IPR000225 GO:0005515
Lele42g0592 691 Pfam Armadillo/beta-catenin-like repeat 422 456 IPR000225 GO:0005515
Lele42g0592 691 Pfam Armadillo/beta-catenin-like repeat 630 672 IPR000225 GO:0005515
Lele42g0592 691 PANTHER PROTEIN ARABIDILLO 1 1 680 - -
Lele42g0592 691 SMART LRR_CC_2 204 229 IPR006553 -
Lele42g0592 691 SMART LRR_CC_2 124 149 IPR006553 -
Lele42g0592 691 SMART LRR_CC_2 178 203 IPR006553 -
Lele42g0592 691 SMART fbox_2 43 83 IPR001810 GO:0005515
Lele42g0592 691 Gene3D - 504 590 IPR011989 -
Lele42g0592 691 Gene3D - 591 685 IPR011989 -
Lele42g0592 691 SMART arm_5 543 584 IPR000225 GO:0005515
Lele42g0592 691 SMART arm_5 499 542 IPR000225 GO:0005515
Lele42g0592 691 SMART arm_5 589 629 IPR000225 GO:0005515
Lele42g0592 691 SMART arm_5 630 673 IPR000225 GO:0005515
Lele42g0592 691 SMART arm_5 417 457 IPR000225 GO:0005515
Lele42g0592 691 SMART arm_5 458 498 IPR000225 GO:0005515
Lele42g0592 691 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 469 511 IPR000225 GO:0005515
Lele42g0592 691 Gene3D Ribonuclease Inhibitor 33 320 IPR032675 -
Lele42g0592 691 SUPERFAMILY RNI-like 46 293 - -
Lele42g0592 691 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 554 585 IPR000225 GO:0005515
Lele42g0592 691 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 510 555 IPR000225 GO:0005515
Lele42g0592 691 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 428 470 IPR000225 GO:0005515
Lele42g0592 691 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 600 642 IPR000225 GO:0005515
Lele42g0592 691 ProSiteProfiles F-box domain profile. 37 83 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0592 Lele-ChrLele42 18477532 18483762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0592 428 668 U-box Gene Family AT2G23140 33.058 3.32e-16 80.5