Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0585 ATGAATTCGTTTCGCAAAATCTTCTTCCGCCACGTTTCTACCGCCTGCACCACCCCAAGAAAGCTCCTGAAGTCCTCAAAAATACCCAAAAGGTACCAAAAATTCGCTGTCCGTGAAGCCCAGAAAGTCCTCACCGATTATCTCCACGAAACTCGATGCTTACCTTTTGTATTGGCGGATCAGATTGGCAAGAACTCCCTCCTTTCCCTCGTTAATCTCATTGAGAAGGTGGACTTCTCCGCCTCCACTTTCTCGAGAAATTTCGAGAAATACCTCAGGTACCACCCCATCGATGAGTTCGAATTTTTCTTTGAAAGCATAGGCATAGACTGCAATAATTGCGTTTCTGAGTCGTTGCCTGCTAATAAGGTCTTCTTTTCTGAAGATGGATCAATTCTGGATGCAGCTTGTGTGCTTTCGGGTTTTGGGTTTCCGTGGGATACGTTGGGTAAGTTGTATAAGGAATGCAGTTCCACTTTTAGGAGAAGTCCCAATGAGTTGGAGTCTAAACTCTGTGACTTTAAGAAGCATGGCTTTGGTAATGTTGAAGTGGTTGGTATATGTCTAGCTTTCCCCAATATCTTAGGTGAGGAAGGTGATGGTGAAATTGATGGTTTGTTTACTGATCTGAAATCAGTATTTTTAGATTTTGAATTGGCAAAATCTGTTGAAGGAAATATAGATTCTTGGCATGAAGTATGTAGAAAAATTCGGGTGTTCTATAATTTAAATGGTGAGAAGGGAAAGTTAGGGGAGCTCATGGGAAGGGCAAAAACTATGTTTATTGAATATGGAGAAGATGAGTTGATTCAAAAAGCAGAGTATTTCTGTAGATTTGGTGTTAAAAAACAGGAAGTAGCACTTTTACTTTTAAAAGCCCCAGAGTTGTTGGATCTTGATTTGGAGATGTCAGTGATTAATGTATCAAAGCTATTGCAACACTTTGGCTTGAGCCCTAAAATTTTGGAGGATGTTAGTAAAAAATATGATCATGTATTAGGGACGAACAAGATGGATAATCTGCCTAATGTAATGAGAGCTTTGGATTTACATGAGTGGTTCTTCAATAAAATGAAGGATGGAAATCATAAGTTGTTGATAAGTTATCTTGCCAACCATCCTAATGAAGACCAGGATAAAGAATATCAAGCTGGCTTAGAGATTATATGTGTTTCAAGTTCCCAAAATCATAGAATGAATAAATTGAATTTCTTGCATGGCTTGGGCTTTGGAGAAAATGCTTTAACTATAAATATTGCAGCTCGCTTGCATGGCTCTAATTGGGAGTTACAGAAAAGGTTTGAATTCCTTCTGCATTTAGGGTTTGAATTCTCAAAGCTCTGTATCATGGTGAAAAAAGCACCTAAAATTCTAAACCAAAAATCTCAAGTTGTAGATGAGAAGGTGAAATTCTTCTGTCAGGAAATGGGAATCCCTGTCCAGTGTTTGACCCCTTTGGCATCACTTTTGTCTTATAATCTAGAGAACTGGATTAAGCCTAGGCACGAATTTCATATGTGGCTTGAAGAAAAGGGTCTGCTTGTAGAAAAGTATTCCATCATAACTGTGTTTGCTTGTAGCAACAATCGTTTTGTAGATATGGCTTATAACATTCATCCAGCTGCTCCAAAACATTGGCTTGAGCAATTCTATATACCTCTAAACACTCAGTGTTATAATCATTAG 1686 0.3855 MNSFRKIFFRHVSTACTTPRKLLKSSKIPKRYQKFAVREAQKVLTDYLHETRCLPFVLADQIGKNSLLSLVNLIEKVDFSASTFSRNFEKYLRYHPIDEFEFFFESIGIDCNNCVSESLPANKVFFSEDGSILDAACVLSGFGFPWDTLGKLYKECSSTFRRSPNELESKLCDFKKHGFGNVEVVGICLAFPNILGEEGDGEIDGLFTDLKSVFLDFELAKSVEGNIDSWHEVCRKIRVFYNLNGEKGKLGELMGRAKTMFIEYGEDELIQKAEYFCRFGVKKQEVALLLLKAPELLDLDLEMSVINVSKLLQHFGLSPKILEDVSKKYDHVLGTNKMDNLPNVMRALDLHEWFFNKMKDGNHKLLISYLANHPNEDQDKEYQAGLEIICVSSSQNHRMNKLNFLHGLGFGENALTINIAARLHGSNWELQKRFEFLLHLGFEFSKLCIMVKKAPKILNQKSQVVDEKVKFFCQEMGIPVQCLTPLASLLSYNLENWIKPRHEFHMWLEEKGLLVEKYSIITVFACSNNRFVDMAYNIHPAAPKHWLEQFYIPLNTQCYNH 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0585 561 Pfam mTERF 139 346 IPR003690 GO:0003690|GO:0006355
Lele42g0585 561 Pfam mTERF 399 531 IPR003690 GO:0003690|GO:0006355
Lele42g0585 561 Gene3D Transcription termination factor 3, mitochondrial 368 547 IPR038538 -
Lele42g0585 561 Gene3D Transcription termination factor 3, mitochondrial 223 359 IPR038538 -
Lele42g0585 561 SMART mt_12 448 479 IPR003690 GO:0003690|GO:0006355
Lele42g0585 561 SMART mt_12 287 318 IPR003690 GO:0003690|GO:0006355
Lele42g0585 561 SMART mt_12 150 180 IPR003690 GO:0003690|GO:0006355
Lele42g0585 561 SMART mt_12 252 282 IPR003690 GO:0003690|GO:0006355
Lele42g0585 561 PANTHER CGI-12 PROTEIN-RELATED 148 534 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0585 Lele-ChrLele42 18292207 18293892 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele42g0585 mTERF 9.8e-11 No_clan