Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0572 ATGGAAAGTGATGCCCAAGACACCTCTGGTTCATCCTCTTCATCTCCATCATCATCATCATCATCTTCTTCATCATCAAACTCAGATGCAGGTACCAAGAGAGACTCAACAAGTGTTTCTGATCAGAATAATGGCGATTATTCCTGCAACAACCACAGCAAGAAGCAGATCAGAAGTGAAGAAAAGGATCATAATAATAATAATAATAATACAAACAACAATAAGCATCCATCGTACAGAGGTGTGAGGATGAGGAACTGGGGAAAATGGGTTTCAGAGATTCGTGAGCCAAGGAAGAAATCCAGAATATGGCTTGGAACTTACCCTACTGCAGAAATGGCAGCTCGAGCTCACGACGTCGCGGCTTTAGCCATCAAAGGTCATTCGGCTTACCTCAATTTCCCTAACTTGGCTCCCTCGCTTCCCCGGCCGGCCACCAACTCTCCAAAGGACATCCAAGCCGCTGCGGCAAAGGCTGCGTCTACTGTCTTCGAGGTGGCCACTAGTAATAAGCATTGTCAAGCTGAGGAAGCCGAAGACAACAGAGCTGAGCCGGCTTCATCATCTTCAACTCAAGATCAGTCTTCTTGTTCTGCAATATCTTCGTCTAAGGAAGAAGACGCAGCTTTGTTTGACCTACCAGATCTTTTCACTGATGGCAACAATGGCCTTTGTTCTTATTCTTCTGTTTCTTCTTCATCTTCTTCTTCTTGGAATTTTTGTGCAGCTGATAGTGGTTTCAAGCTTCAGGAGCCATTTCTTTGGGAAAATTACTAG 777 0.4466 MESDAQDTSGSSSSSPSSSSSSSSSSNSDAGTKRDSTSVSDQNNGDYSCNNHSKKQIRSEEKDHNNNNNNTNNNKHPSYRGVRMRNWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHSAYLNFPNLAPSLPRPATNSPKDIQAAAAKAASTVFEVATSNKHCQAEEAEDNRAEPASSSSTQDQSSCSAISSSKEEDAALFDLPDLFTDGNNGLCSYSSVSSSSSSSWNFCAADSGFKLQEPFLWENY 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0572 258 Pfam AP2 domain 77 128 IPR001471 GO:0003700|GO:0006355
Lele42g0572 258 MobiDBLite consensus disorder prediction 171 201 - -
Lele42g0572 258 Coils Coil 54 74 - -
Lele42g0572 258 Gene3D AP2/ERF domain 78 136 IPR036955 GO:0003700|GO:0006355
Lele42g0572 258 CDD AP2 77 137 IPR001471 GO:0003700|GO:0006355
Lele42g0572 258 ProSiteProfiles AP2/ERF domain profile. 78 135 IPR001471 GO:0003700|GO:0006355
Lele42g0572 258 SUPERFAMILY DNA-binding domain 78 136 IPR016177 GO:0003677
Lele42g0572 258 MobiDBLite consensus disorder prediction 1 52 - -
Lele42g0572 258 PRINTS Ethylene responsive element binding protein signature 101 117 IPR001471 GO:0003700|GO:0006355
Lele42g0572 258 PRINTS Ethylene responsive element binding protein signature 79 90 IPR001471 GO:0003700|GO:0006355
Lele42g0572 258 SMART rav1_2 78 141 IPR001471 GO:0003700|GO:0006355
Lele42g0572 258 MobiDBLite consensus disorder prediction 1 81 - -
Lele42g0572 258 FunFam Ethylene-responsive transcription factor 2 77 136 - -
Lele42g0572 258 MobiDBLite consensus disorder prediction 184 201 - -
Lele42g0572 258 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 60 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0572 Lele-ChrLele42 17746527 17747303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0572 74 254 AP2-EREBP Transcription Factor Family AT2G44940 54.589 2.67e-69 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele42g0572 AP2 1.4e-14 CL0081