Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0567 ATGGTACGCTTCTCGAGGTTTTCTACACAACGGTTTCTCTATACTCTCTACAATTCCCCCACTAAGACGGCGCCTTCACCGTCGCCCGCCGCCTCTCTCCTCGTCGGCACCTTCCACCTCCGCCATTTCTCCGCAGGAAACCTTGCGCGGGCCAAAGATGATAAGGAGCCATGGTGGAAGGAGTCGATGGAAAGACTTCGTAACATTGGGATCTCGGCGCACATTGACTCCGGCAAGACCACGCTGACAGAAAGGATTCTGTTCTACACAGGGCGAATCCACGAGATTCATGAAGTTAGAGGTAAAGATGGAGTGGGTGCTAAGATGGATTCTATGGATTTGGAGAGGGAGAAGGGGATTACTATTCAGTCGGCAGCTACCTACTGCTCTTGGAAAGACTATAAGATTAACATAATTGATACGCCTGGTCACGTTGATTTCACCATTGAAGTTGAGAGGGCTCTGCGTGTTCTTGATGGTGCTATTCTTGTCCTATGTAGTGTTGGGGGAGTGCAAAGTCAGTCTATTACTGTTGATCGTCAAATGAGAAGATACGAAGTCCCAAGGCTTGCATTTATCAATAAACTAGATCGGATGGGAGCAGATCCTTGGAAGGTTTTGAATCAGGCAAGGTCTAAACTTCGGCATCATAGTGCTGCAGTGCAAGTTCCAATAGGCTTGGAGGAAGATTTCAAGGGTCTCATTGATCTTGTGCAATTAAAGGCCTACTATTTTCATGGCTCCAATGGTGAAAAAGTTGTTGCTGATGATGTACCTGCAGATATGGAGACCATGGTTGCAGAAAAAAGGCGAGAGCTTATTGAAGTTGTGTCAGAAGTTGATGATAAACTTGCCGAAGCATTTCTCAATGATGAGCCCATGTCATCTGCTGATCTTGAGGAAGCAATTCGTAGAGCCACTGTAGTACGCAAATTTATACCAGTATTCATGGGCAGTGCCTTCAAAAACAAGGGGGTTCAGACACTTCTGGATGGTGTACTTAATTATTTGCCATGTCCAGTTGAAGTTAGCAATTATGCCCTTGATCAGACAAAGAATGAGGAAAAGGTTATGTTGTCTGGAACTCCTGATGGGCCACTTGTGGCACTAGCTTTCAAATTGGAAGAAGGGCGATTTGGTCAGTTAACATATTTAAGAATCTATGAAGGTGTCATTCGGAAGGGTGAATTTATTATTAACATAAATACTGGCAAGAAGCTTAAGGTTCCTCGCTTGGTTCGGATGCATTCAGATGAGATGGAGGACATTCAAGAGGCTCATGCTGGGCAAATAGTTGCTGTATTTGGTGTTGATTGTGCATCAGGAGATACTTTTACTGATGGGTCAGTCAGATACACAATGACTTCTATGAATGTACCTGAGCCAGTGATGTCATTGGCTGTACAACCCATTTCAAAAGATTCTGGAGGGCAATTTTCAAAAGCTTTGAATCGCTTCCAGAGAGAGGATCCTACTTTCCGTGTTGGCTTGGACCCAGAGAGTGGGCAGACGATCATTTCGGGAATGGGGGAATTGCATTTAGAAGTCTATATTGAACGCATTAGGAGAGAGTATAAGGTTGATGCTACTGTTGGAAAGCCTCGTGTTAATTTTAGAGAGACTGTTACTCAGCGGGCCAACTTTGATTATTTACATAAAAAACAATCTGGAGGGCAAGGTCAATATGGTCGAGTAATTGGCTATATTGAACCTCTTCCAGCAGGGTCCCCAACTAAGTTTGAATTTGAAAACTTGCTTGTTGGGCAGGCTATACCATCAGGTTTTATCCCAGCAATTGAGAAGGGTTTCAAAGAAGCTGCAAACTCGGGTTCTTTAATTGGACATCCAGTTGAAAATCTTCGGGTTGTCTTGACAGATGGTGCTGCTCATGCTGTCGATTCCAGTGAACTTGCATTTAAATTAGCTTCTATCTATGCTTTTAGACAGTGCTATGCAGCTTCCAGACCTGTTATATTAGAACCTATTATGCTTGTTGAGCTGAAAGTACCAACGGAATTTCAGGGGGCTGTTGCTGGCGACATTAACAAGAGAAAAGGTGTGATCGTTGGAAATGACCAGGACGGAGAGGATTCGGTTATTACTGCCCATGTTCCTCTTAACAATATGTTTGGATACTCCACATCACTTCGATCAATGACACAGGGTAAAGGGGAATTTACGATGGAGTACAAAGAGCATTCACCAGTCTCTCATGATGTACAGATTCAATTGATAAACAGCTACAAAAGCACCAAGGGAACTGAATAG 2268 0.4383 MVRFSRFSTQRFLYTLYNSPTKTAPSPSPAASLLVGTFHLRHFSAGNLARAKDDKEPWWKESMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGKDGVGAKMDSMDLEREKGITIQSAATYCSWKDYKINIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLNQARSKLRHHSAAVQVPIGLEEDFKGLIDLVQLKAYYFHGSNGEKVVADDVPADMETMVAEKRRELIEVVSEVDDKLAEAFLNDEPMSSADLEEAIRRATVVRKFIPVFMGSAFKNKGVQTLLDGVLNYLPCPVEVSNYALDQTKNEEKVMLSGTPDGPLVALAFKLEEGRFGQLTYLRIYEGVIRKGEFIININTGKKLKVPRLVRMHSDEMEDIQEAHAGQIVAVFGVDCASGDTFTDGSVRYTMTSMNVPEPVMSLAVQPISKDSGGQFSKALNRFQREDPTFRVGLDPESGQTIISGMGELHLEVYIERIRREYKVDATVGKPRVNFRETVTQRANFDYLHKKQSGGQGQYGRVIGYIEPLPAGSPTKFEFENLLVGQAIPSGFIPAIEKGFKEAANSGSLIGHPVENLRVVLTDGAAHAVDSSELAFKLASIYAFRQCYAASRPVILEPIMLVELKVPTEFQGAVAGDINKRKGVIVGNDQDGEDSVITAHVPLNNMFGYSTSLRSMTQGKGEFTMEYKEHSPVSHDVQIQLINSYKSTKGTE 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0567 755 FunFam Elongation factor G, mitochondrial 57 344 - -
Lele42g0567 755 Gene3D - 58 343 IPR027417 -
Lele42g0567 755 CDD mtEFG1_C 660 737 IPR035649 -
Lele42g0567 755 Pfam Elongation Factor G, domain III 459 533 IPR041095 -
Lele42g0567 755 SUPERFAMILY Translation proteins 306 457 IPR009000 -
Lele42g0567 755 Gene3D Elongation Factor G (Translational Gtpase), domain 3 466 539 - -
Lele42g0567 755 Pfam Elongation factor G, domain IV 534 654 IPR005517 GO:0005525
Lele42g0567 755 PRINTS GTP-binding elongation factor signature 137 147 IPR000795 GO:0003924|GO:0005525
Lele42g0567 755 PRINTS GTP-binding elongation factor signature 153 164 IPR000795 GO:0003924|GO:0005525
Lele42g0567 755 PRINTS GTP-binding elongation factor signature 189 198 IPR000795 GO:0003924|GO:0005525
Lele42g0567 755 PRINTS GTP-binding elongation factor signature 68 81 IPR000795 GO:0003924|GO:0005525
Lele42g0567 755 PRINTS GTP-binding elongation factor signature 117 125 IPR000795 GO:0003924|GO:0005525
Lele42g0567 755 Hamap Elongation factor G [fusA]. 62 748 IPR004540 GO:0003746|GO:0005525|GO:0006414
Lele42g0567 755 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 110 125 IPR031157 -
Lele42g0567 755 Pfam Elongation factor Tu GTP binding domain 65 338 IPR000795 GO:0003924|GO:0005525
Lele42g0567 755 Pfam Elongation factor Tu domain 2 380 446 IPR004161 GO:0005525
Lele42g0567 755 CDD EFG_mtEFG1_IV 538 653 IPR005517 GO:0005525
Lele42g0567 755 Gene3D Translation factors 348 465 - -
Lele42g0567 755 Gene3D - 661 731 - -
Lele42g0567 755 TIGRFAM small_GTP: small GTP-binding protein domain 66 238 IPR005225 GO:0005525
Lele42g0567 755 Pfam Elongation factor G C-terminus 658 741 IPR000640 -
Lele42g0567 755 SUPERFAMILY Ribosomal protein S5 domain 2-like 534 656 IPR020568 -
Lele42g0567 755 TIGRFAM EF-G: translation elongation factor G 62 747 IPR004540 GO:0003746|GO:0005525|GO:0006414
Lele42g0567 755 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 64 341 IPR000795 GO:0003924|GO:0005525
Lele42g0567 755 CDD mtEFG1_II_like 367 447 - -
Lele42g0567 755 FunFam Elongation factor G 463 539 - -
Lele42g0567 755 PANTHER ELONGATION FACTOR G, MITOCHONDRIAL 10 747 - -
Lele42g0567 755 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 338 IPR027417 -
Lele42g0567 755 SMART EFG_IV_2 535 655 IPR005517 GO:0005525
Lele42g0567 755 FunFam Elongation factor G, mitochondrial 349 462 - -
Lele42g0567 755 Gene3D - 540 744 IPR014721 -
Lele42g0567 755 FunFam Elongation factor G 540 676 - -
Lele42g0567 755 CDD EFG_III 460 535 IPR009022 -
Lele42g0567 755 SMART EFG_C_a 657 744 IPR000640 -
Lele42g0567 755 CDD EF-G 68 340 - -
Lele42g0567 755 SUPERFAMILY EF-G C-terminal domain-like 660 752 IPR035647 -
Lele42g0567 755 SUPERFAMILY EF-G C-terminal domain-like 457 534 IPR035647 -
Lele42g0567 755 FunFam Elongation factor G 661 731 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0567 Lele-ChrLele42 17605765 17628425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0567 382 542 Eukaryotic Initiation Factors Gene Family AT3G22980 24.157 5.88e-09 57.8