Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele42g0567 | ATGGTACGCTTCTCGAGGTTTTCTACACAACGGTTTCTCTATACTCTCTACAATTCCCCCACTAAGACGGCGCCTTCACCGTCGCCCGCCGCCTCTCTCCTCGTCGGCACCTTCCACCTCCGCCATTTCTCCGCAGGAAACCTTGCGCGGGCCAAAGATGATAAGGAGCCATGGTGGAAGGAGTCGATGGAAAGACTTCGTAACATTGGGATCTCGGCGCACATTGACTCCGGCAAGACCACGCTGACAGAAAGGATTCTGTTCTACACAGGGCGAATCCACGAGATTCATGAAGTTAGAGGTAAAGATGGAGTGGGTGCTAAGATGGATTCTATGGATTTGGAGAGGGAGAAGGGGATTACTATTCAGTCGGCAGCTACCTACTGCTCTTGGAAAGACTATAAGATTAACATAATTGATACGCCTGGTCACGTTGATTTCACCATTGAAGTTGAGAGGGCTCTGCGTGTTCTTGATGGTGCTATTCTTGTCCTATGTAGTGTTGGGGGAGTGCAAAGTCAGTCTATTACTGTTGATCGTCAAATGAGAAGATACGAAGTCCCAAGGCTTGCATTTATCAATAAACTAGATCGGATGGGAGCAGATCCTTGGAAGGTTTTGAATCAGGCAAGGTCTAAACTTCGGCATCATAGTGCTGCAGTGCAAGTTCCAATAGGCTTGGAGGAAGATTTCAAGGGTCTCATTGATCTTGTGCAATTAAAGGCCTACTATTTTCATGGCTCCAATGGTGAAAAAGTTGTTGCTGATGATGTACCTGCAGATATGGAGACCATGGTTGCAGAAAAAAGGCGAGAGCTTATTGAAGTTGTGTCAGAAGTTGATGATAAACTTGCCGAAGCATTTCTCAATGATGAGCCCATGTCATCTGCTGATCTTGAGGAAGCAATTCGTAGAGCCACTGTAGTACGCAAATTTATACCAGTATTCATGGGCAGTGCCTTCAAAAACAAGGGGGTTCAGACACTTCTGGATGGTGTACTTAATTATTTGCCATGTCCAGTTGAAGTTAGCAATTATGCCCTTGATCAGACAAAGAATGAGGAAAAGGTTATGTTGTCTGGAACTCCTGATGGGCCACTTGTGGCACTAGCTTTCAAATTGGAAGAAGGGCGATTTGGTCAGTTAACATATTTAAGAATCTATGAAGGTGTCATTCGGAAGGGTGAATTTATTATTAACATAAATACTGGCAAGAAGCTTAAGGTTCCTCGCTTGGTTCGGATGCATTCAGATGAGATGGAGGACATTCAAGAGGCTCATGCTGGGCAAATAGTTGCTGTATTTGGTGTTGATTGTGCATCAGGAGATACTTTTACTGATGGGTCAGTCAGATACACAATGACTTCTATGAATGTACCTGAGCCAGTGATGTCATTGGCTGTACAACCCATTTCAAAAGATTCTGGAGGGCAATTTTCAAAAGCTTTGAATCGCTTCCAGAGAGAGGATCCTACTTTCCGTGTTGGCTTGGACCCAGAGAGTGGGCAGACGATCATTTCGGGAATGGGGGAATTGCATTTAGAAGTCTATATTGAACGCATTAGGAGAGAGTATAAGGTTGATGCTACTGTTGGAAAGCCTCGTGTTAATTTTAGAGAGACTGTTACTCAGCGGGCCAACTTTGATTATTTACATAAAAAACAATCTGGAGGGCAAGGTCAATATGGTCGAGTAATTGGCTATATTGAACCTCTTCCAGCAGGGTCCCCAACTAAGTTTGAATTTGAAAACTTGCTTGTTGGGCAGGCTATACCATCAGGTTTTATCCCAGCAATTGAGAAGGGTTTCAAAGAAGCTGCAAACTCGGGTTCTTTAATTGGACATCCAGTTGAAAATCTTCGGGTTGTCTTGACAGATGGTGCTGCTCATGCTGTCGATTCCAGTGAACTTGCATTTAAATTAGCTTCTATCTATGCTTTTAGACAGTGCTATGCAGCTTCCAGACCTGTTATATTAGAACCTATTATGCTTGTTGAGCTGAAAGTACCAACGGAATTTCAGGGGGCTGTTGCTGGCGACATTAACAAGAGAAAAGGTGTGATCGTTGGAAATGACCAGGACGGAGAGGATTCGGTTATTACTGCCCATGTTCCTCTTAACAATATGTTTGGATACTCCACATCACTTCGATCAATGACACAGGGTAAAGGGGAATTTACGATGGAGTACAAAGAGCATTCACCAGTCTCTCATGATGTACAGATTCAATTGATAAACAGCTACAAAAGCACCAAGGGAACTGAATAG | 2268 | 0.4383 | MVRFSRFSTQRFLYTLYNSPTKTAPSPSPAASLLVGTFHLRHFSAGNLARAKDDKEPWWKESMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGKDGVGAKMDSMDLEREKGITIQSAATYCSWKDYKINIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLNQARSKLRHHSAAVQVPIGLEEDFKGLIDLVQLKAYYFHGSNGEKVVADDVPADMETMVAEKRRELIEVVSEVDDKLAEAFLNDEPMSSADLEEAIRRATVVRKFIPVFMGSAFKNKGVQTLLDGVLNYLPCPVEVSNYALDQTKNEEKVMLSGTPDGPLVALAFKLEEGRFGQLTYLRIYEGVIRKGEFIININTGKKLKVPRLVRMHSDEMEDIQEAHAGQIVAVFGVDCASGDTFTDGSVRYTMTSMNVPEPVMSLAVQPISKDSGGQFSKALNRFQREDPTFRVGLDPESGQTIISGMGELHLEVYIERIRREYKVDATVGKPRVNFRETVTQRANFDYLHKKQSGGQGQYGRVIGYIEPLPAGSPTKFEFENLLVGQAIPSGFIPAIEKGFKEAANSGSLIGHPVENLRVVLTDGAAHAVDSSELAFKLASIYAFRQCYAASRPVILEPIMLVELKVPTEFQGAVAGDINKRKGVIVGNDQDGEDSVITAHVPLNNMFGYSTSLRSMTQGKGEFTMEYKEHSPVSHDVQIQLINSYKSTKGTE | 755 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele42g0567 | 755 | FunFam | Elongation factor G, mitochondrial | 57 | 344 | - | - | |
Lele42g0567 | 755 | Gene3D | - | 58 | 343 | IPR027417 | - | |
Lele42g0567 | 755 | CDD | mtEFG1_C | 660 | 737 | IPR035649 | - | |
Lele42g0567 | 755 | Pfam | Elongation Factor G, domain III | 459 | 533 | IPR041095 | - | |
Lele42g0567 | 755 | SUPERFAMILY | Translation proteins | 306 | 457 | IPR009000 | - | |
Lele42g0567 | 755 | Gene3D | Elongation Factor G (Translational Gtpase), domain 3 | 466 | 539 | - | - | |
Lele42g0567 | 755 | Pfam | Elongation factor G, domain IV | 534 | 654 | IPR005517 | GO:0005525 | |
Lele42g0567 | 755 | PRINTS | GTP-binding elongation factor signature | 137 | 147 | IPR000795 | GO:0003924|GO:0005525 | |
Lele42g0567 | 755 | PRINTS | GTP-binding elongation factor signature | 153 | 164 | IPR000795 | GO:0003924|GO:0005525 | |
Lele42g0567 | 755 | PRINTS | GTP-binding elongation factor signature | 189 | 198 | IPR000795 | GO:0003924|GO:0005525 | |
Lele42g0567 | 755 | PRINTS | GTP-binding elongation factor signature | 68 | 81 | IPR000795 | GO:0003924|GO:0005525 | |
Lele42g0567 | 755 | PRINTS | GTP-binding elongation factor signature | 117 | 125 | IPR000795 | GO:0003924|GO:0005525 | |
Lele42g0567 | 755 | Hamap | Elongation factor G [fusA]. | 62 | 748 | IPR004540 | GO:0003746|GO:0005525|GO:0006414 | |
Lele42g0567 | 755 | ProSitePatterns | Translational (tr)-type guanine nucleotide-binding (G) domain signature. | 110 | 125 | IPR031157 | - | |
Lele42g0567 | 755 | Pfam | Elongation factor Tu GTP binding domain | 65 | 338 | IPR000795 | GO:0003924|GO:0005525 | |
Lele42g0567 | 755 | Pfam | Elongation factor Tu domain 2 | 380 | 446 | IPR004161 | GO:0005525 | |
Lele42g0567 | 755 | CDD | EFG_mtEFG1_IV | 538 | 653 | IPR005517 | GO:0005525 | |
Lele42g0567 | 755 | Gene3D | Translation factors | 348 | 465 | - | - | |
Lele42g0567 | 755 | Gene3D | - | 661 | 731 | - | - | |
Lele42g0567 | 755 | TIGRFAM | small_GTP: small GTP-binding protein domain | 66 | 238 | IPR005225 | GO:0005525 | |
Lele42g0567 | 755 | Pfam | Elongation factor G C-terminus | 658 | 741 | IPR000640 | - | |
Lele42g0567 | 755 | SUPERFAMILY | Ribosomal protein S5 domain 2-like | 534 | 656 | IPR020568 | - | |
Lele42g0567 | 755 | TIGRFAM | EF-G: translation elongation factor G | 62 | 747 | IPR004540 | GO:0003746|GO:0005525|GO:0006414 | |
Lele42g0567 | 755 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 64 | 341 | IPR000795 | GO:0003924|GO:0005525 | |
Lele42g0567 | 755 | CDD | mtEFG1_II_like | 367 | 447 | - | - | |
Lele42g0567 | 755 | FunFam | Elongation factor G | 463 | 539 | - | - | |
Lele42g0567 | 755 | PANTHER | ELONGATION FACTOR G, MITOCHONDRIAL | 10 | 747 | - | - | |
Lele42g0567 | 755 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 63 | 338 | IPR027417 | - | |
Lele42g0567 | 755 | SMART | EFG_IV_2 | 535 | 655 | IPR005517 | GO:0005525 | |
Lele42g0567 | 755 | FunFam | Elongation factor G, mitochondrial | 349 | 462 | - | - | |
Lele42g0567 | 755 | Gene3D | - | 540 | 744 | IPR014721 | - | |
Lele42g0567 | 755 | FunFam | Elongation factor G | 540 | 676 | - | - | |
Lele42g0567 | 755 | CDD | EFG_III | 460 | 535 | IPR009022 | - | |
Lele42g0567 | 755 | SMART | EFG_C_a | 657 | 744 | IPR000640 | - | |
Lele42g0567 | 755 | CDD | EF-G | 68 | 340 | - | - | |
Lele42g0567 | 755 | SUPERFAMILY | EF-G C-terminal domain-like | 660 | 752 | IPR035647 | - | |
Lele42g0567 | 755 | SUPERFAMILY | EF-G C-terminal domain-like | 457 | 534 | IPR035647 | - | |
Lele42g0567 | 755 | FunFam | Elongation factor G | 661 | 731 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele42g0567 | Lele-ChrLele42 | 17605765 | 17628425 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele42g0567 | 382 | 542 | Eukaryotic Initiation Factors Gene Family | AT3G22980 | 24.157 | 5.88e-09 | 57.8 |