Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0531 ATGGCTTCCCCTCCTTCTTCTCCTGTTGACTCCTCAACCACTACCCCTCCCACCGATCCTCCCACCGCCGTCCCTTTCGCGGTTGCTGCTCCTCCGGCTTTGCCCTCTTCGCAGCCTCCGTCATCCTCTCGCCGCCTTCCGCCACCGTGCTGGTCTGCTGAGGAGACCGTCGCTCTCATTGACGCGTACCGTGACAAGTGGTATTCTCTTGGCCGGGGTAATCTTAAGGCCACGCATTGGCAAGATGTAGCCGATGCCGTTACGTCCCACTGCCCTGGTGCTTCGCCGGCCAAAACCGCCGTCCAGTGTCGCCACAAGATGGAGAAGCTCCGGAAGAGGTACCGCACGGAGATCCAACGCGTGAGCAACCTGCCTGTTGCCAGGTTCAATTCCTCTTGGGTTCACTTCAAGCGGATGGATTCCATGGAGAAAGGCTCCTCCCCTGTCAAACATGAGAACGATTCAGATGATAGCCCTGATGAGTTTGACGGCGATGAGGATAATGACTTGTACGACGAATTCAGAAGCGGTAGTGGGTCCAATACGAGGAGCTTGAATAAGTTGTATCGGAATGGCATGGGCGGCTGCACCGTCAACGGCAGCGGTGGATTTCGGATTCGAATTCCCGATGGGGTAAGCATTGCACAACCTGGGAATTCCAAATTATATGGGAAATTATCTGATCAGAAGTATAACTATAACAATAACAACTCCGTCTCAAAATCTGGGCATGGCTTTAATAGTCCCAATTATGAAACTAGGGTTTTAAAAGAGAGAAGTGGAGTGGGGAAAAGAGAAAGAGAGAGGGAGAGAGATCCAGTTAGTGAGATGGTGTGTGCAATTAAGGTTTTGGGAGATGGGTTTGTGAAGATGGAGCAGATGAAGGTGGAGATGGCGAGGGAGATTGAGAGTATGCGTATGGAGATGGAGATGAAGCGGACCGAGATGATTCTGGAATCGCAGCAGAGGATTGTGGAGGCATTTGCAAAAGCAGTTTCAGAGAAGACGACAAAGAGAATGCCTTCATCGCCTTCAGAATCATAG 1044 0.5153 MASPPSSPVDSSTTTPPTDPPTAVPFAVAAPPALPSSQPPSSSRRLPPPCWSAEETVALIDAYRDKWYSLGRGNLKATHWQDVADAVTSHCPGASPAKTAVQCRHKMEKLRKRYRTEIQRVSNLPVARFNSSWVHFKRMDSMEKGSSPVKHENDSDDSPDEFDGDEDNDLYDEFRSGSGSNTRSLNKLYRNGMGGCTVNGSGGFRIRIPDGVSIAQPGNSKLYGKLSDQKYNYNNNNSVSKSGHGFNSPNYETRVLKERSGVGKRERERERDPVSEMVCAIKVLGDGFVKMEQMKVEMAREIESMRMEMEMKRTEMILESQQRIVEAFAKAVSEKTTKRMPSSPSES 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0531 347 FunFam Trihelix transcription factor ASIL2 51 116 - -
Lele42g0531 347 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 24 333 IPR044823 -
Lele42g0531 347 SMART 118neu2 58 147 IPR006578 -
Lele42g0531 347 MobiDBLite consensus disorder prediction 1 46 - -
Lele42g0531 347 MobiDBLite consensus disorder prediction 1 49 - -
Lele42g0531 347 ProSiteProfiles Myb-like domain profile. 51 111 IPR001005 -
Lele42g0531 347 Gene3D - 51 116 - -
Lele42g0531 347 Pfam Myb/SANT-like DNA-binding domain 49 142 IPR044822 -
Lele42g0531 347 MobiDBLite consensus disorder prediction 142 184 - -
Lele42g0531 347 MobiDBLite consensus disorder prediction 142 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0531 Lele-ChrLele42 7202163 7203206 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0531 2 142 Trihelix Transcription Factor Family AT3G14180 31.724 3.00e-17 80.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele42g0531 Myb_DNA-bind_4 4.2e-20 CL0123