Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0528 ATGTCTTCTTCTGCAACTTGGATCACTTCATTCTCATGTTCTTCACCTGTAAAACAAGCCCCAGGTGCTACTCAATGGCTCGAATTTGTCTTCCTCTCTCCATGTCCTCAAAGAGCTCTCTTGTCCGCCGTTGATGTTGTATTCATCCTCGTCCTCTTCGTGCTTGCCGTCAAGAAGCTCTGTTCTAGGTTCACCCCTAATGGCGGCGGCGACCCAGCAGCTGAACTTAACAAGCCCCTTATCAGACATAACAGAGATTTCATCAGAACAACAACGTGGTTTAAGCTAACACTAATTGTGACGGCTGTTTTGACTATATTGTACGCTGTTGCGAGTGTTGTGGTTTTTGTCAGAGACACGCAAGTTCCATGGAAGCAAGTCGATGGATCGTTTTGGTTAGTTCAGGCCGTGACTCATGCGATTCTCACAATCTTAGTCTTTCATGAAAAGAGATTTCAAGCTGTTTCTCACCCGATTCCATTTCGAATCTTTTGGATTGTGAACTTCGTTTTCACTTGTTTGTTCCTAATTTCTGGGGCTGTGCGTTTGGTCTCTGTGGAAGAAACTGAAGGAGGCTTCGACTTTAGGACCGATGATACTGTCTGTTTCATTTCCTTCCCTCTTTCTCTTTTTCTCTTTCTTGTTGCCATTAAAGGATCCACTGGGATCAGCTTCACACAGGAAACTGAATCTCTAATCGATGGGGAAACTGGGGTGAAATCAAACGTGACTGGTTTTGCCTCAGCTTCTATAGCATCCAAGGCATTTTGGCTGTGGATAAATCCATTGTTGAGCAAAGGTTACAAATCTCCTTTGAAGATTGATCAAGTGCCAACACTTTCACCAGAACACAGAGCTGAAAGAATGTCAGTTTTGTTTGAACAGAAATGGCCTAAGCCGCAAGAAAGCTCGAAGCATCCTGTTCTAATCACGCTGCTTCGATGCTTCTGGAAGGAAGCGGCATTCACTGCTTTTCTTGCTGTTGTTCGACTCAGTGTTATGTTCATTGGTCCTGTTCTCATCCAAAGCTTCGTTGATTTCACAGCAGGTAAGAGAAGCTCTATGTATGAAGGATATTACCTCGTGTTGATCCTGCTCGTTGCGAAATTCGTTGAAGTTTTAGCCACTCATCATTTCAACTTCAACTCTCAGAAACTGGGAATGCTTATCCGATGCTCTCTTATTACATCATTGTACAAGAAAGGGCTAAGGTTGTCTTGTTCAGCAAGACAAGACCATGGTATTGGAAATATCGTGAATTATATGGCTGTGGATGCACAACAGCTTTCTGATATGATGTTGCAGCTTCATGCTGTGTGGATGATGCCATTTCAAGTTGGGATTGCCTTATTTTTGCTTTACAAATACTTGGGTGCTGCGGTGGTCACAGCTTTACTTGGAATTCTGGGTGTTCTTGTGTTTGTCATATTCGGTACTCGAAGAAACAACCGGTTCCAGTTCAATGTGATGAAGAATCGGGATTCGAGAATGAAGGCTGTTAATGAGATGCTAAATTACATGAGAGTGATAAAGTTCCAAGCATGGGAAGAGCATTTCAATAAGAGGATTATGGGTTTTCGTGAGTCGGAATTCAGCTGGCTTTCTAAGTTTATGTATTCAATATCTGGGAATATTATTGTGATGTGGAGCACACCACTATTGATATCGACTCTAACGTTTGGGACAGCGATTTTGCTTGGAGTTCCACTCGATGCAGGCACGGTTTTCACCACGACAACAATCTTTAAAATATTGCAGGAACCTATTAGGACATTTCCACAATCAATGATCTCTCTTTCACAAGCCATTATATCACTTGGGAGGTTGGATAGGTATATGATGAGTAAGGAATTATCAGATAATTCGGTAGAGAGAGAGGAAGACTGCGATGGACAAACTGCTGTAGATGTCAAAGATGGCACGTTTAGCTGGGACGATGATGAGAGTAAGGGGGATTATGACTTGAAAAGCATTAATTTGAATATAAAAAAGGGCGACCTCACCGCTATTGTTGGCACCGTCGGCTCGGGAAAATCTTCTCTCCTAGCATCAATTCTTGGTGAGATGCACAAAGTCTCTGGCAAGGTTCGGGTTTGTGGGAGTACGGCATACGTAGCTCAAACATCATGGATTCAAAATGGGACAATTCAAGATAACATCCTGTATGGATTACCGATGGACGGACAGAAATACAGTGAAGTTGTGAGAGTGTGTTGCTTGGACAAGGACTTGGAAATGATGGAGGACGGCGATCAGACAGAGATTGGAGAGCGTGGCATCAACCTTAGTGGAGGACAGAAGCAGAGAATACAACTTGCTAGGGCTGTATATCAAGACTGTGATATCTATCTTCTTGATGATATCTTCAGCGCTGTCGATGCTCATACCGGCTCTGCAATATTCAAGGAATGTGTTAGGGGAGCTCTAAAAGCCAAGACTGTTATTCTTGTAACACACCAAGTTGACTTCCTGCATAATGTTGACCTTATAACGGTGATGAGAGACGGAATGATAGTCCAATCGGGCAAGTATAACAATCTATTAAATTCTGGAATGGATTTCGGAGATCTGGTAGCGGCGCATGAGACTTCTATGGAACTTGTAGAACAAGGCAAAGACATGCCTGGTGAAAATTCCCCCAGACCATCGAAATCTCCCAGATCTCCAAAGCCAGCTTCTAACTTGACAGAGACCAATGGTGAAAGCAATTCTCTCGACCAACCCAAGGCCGGCGGCAAGGAAAATTCTAAACTCATCAAAGATGAAGAGAGGGAAACTGGCAAAGTGAGCCTGCATGTTTATAAACTGTATTGTACTGAGGCTTATGGGTGGTGGGGAATTACCGGAGTAATTCTCATTTCTTTGATATGGCAAGCATCTTTGATGGCTGGTGATTATTGGCTGGCATATGAAACCTCGGAAGAGCAAGCTCGAGTCTTTAACCCGTCTCTTTTTATCTCCGTCTACGCCATTTTTGCCGCAGTTTCAGTTGTTTTGGTGATTATAAGATCCTTCTCTGTCACCATCTTGGGGCTTAAGACAGCACAAATTTTCTTCTCTCAGATTCTTAACAGCATCCTTCATGCACCCATGTCTTTCTTTGATACCACACCTTCCGGAAGAATTTTAAGTAGGGCATCCACTGATCAGACTAATGTTGATGTGTTTCTCCCATTTTTTGTTGGTATTGTGATTTCCATGTACATCACAGTGCTCAGCATCTTCATTGTGACATGTCAAAATTCTTGGCCAACAGTTTTCTTGCTGATTCCTCTGATTTGGTTGAATATATGGTATCGGGGTTATTTCCTTTCTTCATCTCGCGAATTGACTCGCTTGGATTCAATAACTAAAGCACCGGTTATTCATCACTTCTCAGAAAGCATTTCAGGGGTCATGACAATCCGTGCATTCAAAAAGCAGAGGGAATTTTGTGAAGAAAATGTTAAGCGAGTGAATGAAAATCTGCGCATGGATTTCCACAACAATGGTTCCAACGAGTGGTTGGGTTTTCGCTTAGAATTGCTTGGCAGCTTGGTCTTTTGTAGTTCTACTATGTTCATGATTATATTACCCAGCAATATCATAAAGCCAGAAAACGTTGGCTTATCTCTCTCTTATGGTTTGTCCCTGAATGCTGTGTTGTTCTGGGCCATATACATGAGTTGCTTCATTGAGAACAGAATGGTATCTGTGGAGAGGATTAAGCAGTTCACAACAATTCCATCTGAAGCAGAATGGCGTATTAAAGATCGCCTGCCTCCCCGGAATTGGCCTGCCCACGGCCATGTTAATGTCAAAGACTTGCAGGTCAGGTATCGTGCCAACACTCCTTTGGTTCTTAAAGGCATCACATTGAGTATTAGTGGGGGAGAAAAGATTGGTATTGTTGGAAGAACAGGAAGTGGGAAATCTACTTTAATCCAAGTGTTCTTCAGGCTAGTAGAACCTTCAGGAGGAAGAATAATCATCGATGACATCGACATAACTGCATTAGGCCTTCACGACCTCAGGTCTCGTTTCAGTATCATTCCCCAGGAGCCCGTTCTTTTTGAGGGCACTGTTAGGAGCAACATTGATCCAACGGGACAATATTCAGATGAAGACATATGGAAGAGCTTGGAGCGTTGTCAACTGAAAGATGCCGTGGCTTCCAAGCCAGAGAAACTGGACTCTTTAGTGGTTGATAATGGAGAGAACTGGAGTGTTGGACAGAGGCAGTTACTGTGTTTGGGGAGGGTTATGCTTAAGCGAAGCCGGCTCTTGTTCTTGGATGAAGCGACGGCTTCGGTGGATTCACAAACTGATGCAGTGATTCAAAAGATAATAAGAGAGGACTTTGCAGCATGCACCATCATTAGCATTGCTCACAGAATACCAACAGTCATGGACTGTGATAGGGTTCTGGTCATAGATGCGGGGAGAGCAAAAGAATTTGATAAACCCTCCAAGTTGCTTCAGAGGCCATCATTATTTGGGGCATTAGTTCAAGAATATGCCAATCGCTCCTCAGAGCTCTAG 4521 0.4324 MSSSATWITSFSCSSPVKQAPGATQWLEFVFLSPCPQRALLSAVDVVFILVLFVLAVKKLCSRFTPNGGGDPAAELNKPLIRHNRDFIRTTTWFKLTLIVTAVLTILYAVASVVVFVRDTQVPWKQVDGSFWLVQAVTHAILTILVFHEKRFQAVSHPIPFRIFWIVNFVFTCLFLISGAVRLVSVEETEGGFDFRTDDTVCFISFPLSLFLFLVAIKGSTGISFTQETESLIDGETGVKSNVTGFASASIASKAFWLWINPLLSKGYKSPLKIDQVPTLSPEHRAERMSVLFEQKWPKPQESSKHPVLITLLRCFWKEAAFTAFLAVVRLSVMFIGPVLIQSFVDFTAGKRSSMYEGYYLVLILLVAKFVEVLATHHFNFNSQKLGMLIRCSLITSLYKKGLRLSCSARQDHGIGNIVNYMAVDAQQLSDMMLQLHAVWMMPFQVGIALFLLYKYLGAAVVTALLGILGVLVFVIFGTRRNNRFQFNVMKNRDSRMKAVNEMLNYMRVIKFQAWEEHFNKRIMGFRESEFSWLSKFMYSISGNIIVMWSTPLLISTLTFGTAILLGVPLDAGTVFTTTTIFKILQEPIRTFPQSMISLSQAIISLGRLDRYMMSKELSDNSVEREEDCDGQTAVDVKDGTFSWDDDESKGDYDLKSINLNIKKGDLTAIVGTVGSGKSSLLASILGEMHKVSGKVRVCGSTAYVAQTSWIQNGTIQDNILYGLPMDGQKYSEVVRVCCLDKDLEMMEDGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDIFSAVDAHTGSAIFKECVRGALKAKTVILVTHQVDFLHNVDLITVMRDGMIVQSGKYNNLLNSGMDFGDLVAAHETSMELVEQGKDMPGENSPRPSKSPRSPKPASNLTETNGESNSLDQPKAGGKENSKLIKDEERETGKVSLHVYKLYCTEAYGWWGITGVILISLIWQASLMAGDYWLAYETSEEQARVFNPSLFISVYAIFAAVSVVLVIIRSFSVTILGLKTAQIFFSQILNSILHAPMSFFDTTPSGRILSRASTDQTNVDVFLPFFVGIVISMYITVLSIFIVTCQNSWPTVFLLIPLIWLNIWYRGYFLSSSRELTRLDSITKAPVIHHFSESISGVMTIRAFKKQREFCEENVKRVNENLRMDFHNNGSNEWLGFRLELLGSLVFCSSTMFMIILPSNIIKPENVGLSLSYGLSLNAVLFWAIYMSCFIENRMVSVERIKQFTTIPSEAEWRIKDRLPPRNWPAHGHVNVKDLQVRYRANTPLVLKGITLSISGGEKIGIVGRTGSGKSTLIQVFFRLVEPSGGRIIIDDIDITALGLHDLRSRFSIIPQEPVLFEGTVRSNIDPTGQYSDEDIWKSLERCQLKDAVASKPEKLDSLVVDNGENWSVGQRQLLCLGRVMLKRSRLLFLDEATASVDSQTDAVIQKIIREDFAACTIISIAHRIPTVMDCDRVLVIDAGRAKEFDKPSKLLQRPSLFGALVQEYANRSSEL 1506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0528 1506 SUPERFAMILY ABC transporter transmembrane region 305 613 IPR036640 GO:0005524|GO:0016020
Lele42g0528 1506 CDD ABCC_MRP_domain2 1262 1482 - -
Lele42g0528 1506 SUPERFAMILY ABC transporter transmembrane region 944 1244 IPR036640 GO:0005524|GO:0016020
Lele42g0528 1506 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1264 1498 IPR003439 GO:0005524
Lele42g0528 1506 Gene3D - 1248 1496 IPR027417 -
Lele42g0528 1506 MobiDBLite consensus disorder prediction 888 910 - -
Lele42g0528 1506 FunFam ABC transporter C family member 10 304 617 - -
Lele42g0528 1506 CDD ABC_6TM_ABCC_D2 947 1239 IPR044726 GO:0140359
Lele42g0528 1506 Pfam ABC transporter 1281 1429 IPR003439 GO:0005524
Lele42g0528 1506 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 949 1227 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele42g0528 1506 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 247 1500 - -
Lele42g0528 1506 MobiDBLite consensus disorder prediction 869 921 - -
Lele42g0528 1506 Pfam ABC transporter transmembrane region 980 1192 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele42g0528 1506 Pfam ABC transporter transmembrane region 324 588 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele42g0528 1506 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 321 601 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele42g0528 1506 CDD ABC_6TM_ABCC_D1 322 609 IPR044746 GO:0140359
Lele42g0528 1506 Gene3D ABC transporter type 1, transmembrane domain 293 617 IPR036640 GO:0005524|GO:0016020
Lele42g0528 1506 Gene3D ABC transporter type 1, transmembrane domain 909 1245 IPR036640 GO:0005524|GO:0016020
Lele42g0528 1506 Coils Coil 1135 1155 - -
Lele42g0528 1506 CDD ABCC_MRP_domain1 635 836 - -
Lele42g0528 1506 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1257 1497 IPR027417 -
Lele42g0528 1506 FunFam ABC transporter C family member 5 911 1245 - -
Lele42g0528 1506 SMART AAA_5 1290 1483 IPR003593 -
Lele42g0528 1506 SMART AAA_5 664 845 IPR003593 -
Lele42g0528 1506 ProSitePatterns ABC transporters family signature. 762 776 IPR017871 GO:0005524|GO:0016887
Lele42g0528 1506 FunFam ABC transporter C family member 3 1247 1498 - -
Lele42g0528 1506 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 633 858 IPR027417 -
Lele42g0528 1506 FunFam ABC transporter C family member 4 618 879 - -
Lele42g0528 1506 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 635 860 IPR003439 GO:0005524
Lele42g0528 1506 Gene3D - 629 864 IPR027417 -
Lele42g0528 1506 Pfam ABC transporter 655 787 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0528 Lele-ChrLele42 7176536 7182521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0528 617 853 Calmodulin-binding Proteins AT2G36910 30.916 1.09e-23 107