Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0510 ATGCTCTCTCGCTTATGCTATTTCTCTGCATGCTCAGTTTTACCAGGTATGCTTAGATTGAGAAGAATGGAAGAAGAGAGGTTAGTGAATTTTTCTTTTGCTAAAAAAGGGTTATCAAAGTCCAAATCGAGGAAATCTTCAACATTGAAGTCCCATTCTTCTCAATATAAACATACTCTTACCATGTGGAACGTATATTCGATGAAGTGCTTTTACTATTTCAAAGATAAATACAAGAGCAGAGGACAAAGATCAGCTCCTGTGCTGAAAGAGCAAGATAGATCCCATTTTTCAGGAGCTGATAGAATCACCAAATCTGCATGTTCCACAGCCTCCACTCGTAGTATACCAGAATTGTATGAGGAGAGGGCTCATAATTTGCGGGTTTTCTCTTTTACGGAGCTCAGGCGTGTGACAAATGATTTCAATAGGCTTTTTAAGATAGGGGAAGGTGGATTTGGGAGTGTATATAAAGGTTCAATTCAGCCACTTGATGGAAAAGGATATCCTGTTTTAGTTGCCATCAAAAGGCTGAACAAGGATGGATTACAGGGTCATAAGCAATGGTTGGCTGAAGTTCAGTTTCTTGGTGTTGTGGAGCACCCAAATCTCGTCAAACTCATTGGATACTGTGCGGTGGATGGAGAAAGAGGGATTCAAAGACTACTTGTATATGAATATATGCCAAATAAAAGCTTAGAACATCATCTTTTTCATAGGGCATATGATCCTCTTGCTTGGAGAATAAGACTTGAAATACTTCTTGGAGCAGCTCAGGGCTTAGCTTATTTGCATGAAGAATTAGAAGTTCAGATAATATACCGAGATTTCAAGTCTTCAAACGTGTTATTGGATGAAAACTTCAAGCCAAAACTTTCTGATTTCGGACTTGCTAGAGAGGGCCCAATTGCTGGCAATACTCATGTTTCGACTGCGGTGGTTGGTACATTCGGGTATGCTGCTCCAGATTATGTTGAGACGGGCCATCTCACTGCAAAGAGCGATGTGTGGAGTTTTGGTGTGGTTCTGTATGAAGTTCTTACGGGTAGGCGATCACTGGAGAGAAACCGGCCGAAAATGGAGCAGAAACTCTTGGAGTGGGTGAAACACTATCCTGCTGACAGAAAAAAATTCAGCTTGATTATGGATCCACGACTCGAAGGGCAATATTCTCACAACGCGGCTCAAAAAATTGCCAAGCTTGCTGACAGTTGCCTTAGCAAGAGCGCAAAAGAGAGGCCGACAATGAGCCAGGTGGTAGAGAGATTGAAGCAGATAATCCAAGCTTCAGACGAAGAAAGTGTTTCAGAGCCAAGCTTCAAAGTATCCGAAGGTGACCCGCCTGAGCCGGTAGAAAAACCAGATGAATCTGGACCTTCAGAATTGTATAAAAAGAGGATGGCTCATCTTGCAAAGCTTGGAGAACATGTTGAGAGTGATAGTAGAAGAAGATTTATGATCCTGCAGAAGGGTAAAGTCTCTTGA 1485 0.4195 MLSRLCYFSACSVLPGMLRLRRMEEERLVNFSFAKKGLSKSKSRKSSTLKSHSSQYKHTLTMWNVYSMKCFYYFKDKYKSRGQRSAPVLKEQDRSHFSGADRITKSACSTASTRSIPELYEERAHNLRVFSFTELRRVTNDFNRLFKIGEGGFGSVYKGSIQPLDGKGYPVLVAIKRLNKDGLQGHKQWLAEVQFLGVVEHPNLVKLIGYCAVDGERGIQRLLVYEYMPNKSLEHHLFHRAYDPLAWRIRLEILLGAAQGLAYLHEELEVQIIYRDFKSSNVLLDENFKPKLSDFGLAREGPIAGNTHVSTAVVGTFGYAAPDYVETGHLTAKSDVWSFGVVLYEVLTGRRSLERNRPKMEQKLLEWVKHYPADRKKFSLIMDPRLEGQYSHNAAQKIAKLADSCLSKSAKERPTMSQVVERLKQIIQASDEESVSEPSFKVSEGDPPEPVEKPDESGPSELYKKRMAHLAKLGEHVESDSRRRFMILQKGKVS 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0510 494 CDD STKc_IRAK 148 426 - -
Lele42g0510 494 Pfam Protein kinase domain 144 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0510 494 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 228 436 - -
Lele42g0510 494 MobiDBLite consensus disorder prediction 429 461 - -
Lele42g0510 494 ProSitePatterns Protein kinases ATP-binding region signature. 148 176 IPR017441 GO:0005524
Lele42g0510 494 PANTHER OS01G0588500 PROTEIN-RELATED 58 426 - -
Lele42g0510 494 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
Lele42g0510 494 SUPERFAMILY Protein kinase-like (PK-like) 124 423 IPR011009 -
Lele42g0510 494 MobiDBLite consensus disorder prediction 446 461 - -
Lele42g0510 494 ProSiteProfiles Protein kinase domain profile. 142 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0510 494 Gene3D Transferase(Phosphotransferase) domain 1 228 443 - -
Lele42g0510 494 Gene3D Phosphorylase Kinase; domain 1 114 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0510 Lele-ChrLele42 5823949 5829062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0510 68 453 Glycoside Hydrolase AT3G07070 40.796 1.56e-93 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele42g0510 Pkinase 1.6e-45 CL0016