Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0483 ATGATAGTACCCAGTTTTTATGTTATCGAAAGACACCCTTTTGTCAATGATAATCTTTCTCCTGCGTTTCAGGGAGGTTTACACTTGCGAGTCCCTCGGTCCAATTCATTCGCTTTTCAAGAACCTAATACCAAGTGTGAACTTGTTAAGTCAGTCAAACTTGAGAGAGTCTATGACTCAAGACAAGAAAGTGTTTTAGTGAAGGTGTTATTGTGGTTAGTGTTAGGAACTGGAGGCTTTGAACTTGCATGCATCTTTCTCTTTTGGTGTCTGACATGGAAAAAATCAAGTAAGCAGCATAGTTATGATTATCTTACTGGAACTGGGTTTAGAAAATATAGCTACTCTGAGTTGAAAGAAGCAACAAGATGTTTCAGTGAAGAGATAGGAAGGGGTGCTGGAGGAATTGTATATAAGGGAACACTAAAAGATGGGCGAGTTACTGCAATTAAGAGACTCAGCGAAGCAAACCAAATAGAAAGTGAGTTTCTTGCAAAAGTCAACTTAATAGGAAGGCTTAACCACATGTACTTAATTTACATGTGGGGATATTGTGCAGAAGGAAAGTACATAATGTTGCCTAAGGTTGCAGATTTTGGATTGTCGAAGTTGCAGAATAGAAACGTTGTAAAGAATCCAAGCTTCTCAAGGATCAGAGGAACAAGTGGATATATGGCACCAGAGTGGGTTTTCAACTTACCAATAACATCCAAGGTTGATGTTTACAGCCATGGAATTGTGGTGTTGGAGATGATAACAGGAAAAAGTTTTAGGGTGGATGGACCAGATCACTCGCATCATGTGAGGCTAGTGACATGGGTGAGAGACAAGAAGAACAAAGGAAAAGAATATGATACATCATCGTGGGTGGAAAACATTGTTGATCCAACAGTTGAGGGAAGTTATAAGAAGAAAAAGATGGAGGTTTTGATTACAGTGGCATTACAATGTGTTGTGGAAGACAAAGATGCAAGGCCTTCAATGAGCCGCGTGGTAGAAATGCGTCAAAGTTGTGAGAGATCGACTCTTAATTCGACAAATGATATGTATAAATTATCAAGACCCTTTTCTTTTTCCTTGAAGTATGTGGTCTTAGTCTTAGCAAATAGAGTGTAA 1116 0.3898 MIVPSFYVIERHPFVNDNLSPAFQGGLHLRVPRSNSFAFQEPNTKCELVKSVKLERVYDSRQESVLVKVLLWLVLGTGGFELACIFLFWCLTWKKSSKQHSYDYLTGTGFRKYSYSELKEATRCFSEEIGRGAGGIVYKGTLKDGRVTAIKRLSEANQIESEFLAKVNLIGRLNHMYLIYMWGYCAEGKYIMLPKVADFGLSKLQNRNVVKNPSFSRIRGTSGYMAPEWVFNLPITSKVDVYSHGIVVLEMITGKSFRVDGPDHSHHVRLVTWVRDKKNKGKEYDTSSWVENIVDPTVEGSYKKKKMEVLITVALQCVVEDKDARPSMSRVVEMRQSCERSTLNSTNDMYKLSRPFSFSLKYVVLVLANRV 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0483 371 PANTHER OS07G0415500 PROTEIN 13 189 - -
Lele42g0483 371 FunFam S-receptor-like serine/threonine-protein kinase 92 196 - -
Lele42g0483 371 ProSiteProfiles Protein kinase domain profile. 1 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0483 371 SUPERFAMILY Protein kinase-like (PK-like) 110 343 IPR011009 -
Lele42g0483 371 Gene3D Phosphorylase Kinase; domain 1 90 190 - -
Lele42g0483 371 Gene3D Transferase(Phosphotransferase) domain 1 191 355 - -
Lele42g0483 371 Pfam Protein kinase domain 195 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0483 371 ProSitePatterns Protein kinases ATP-binding region signature. 129 151 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0483 Lele-ChrLele42 4906975 4908286 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0483 113 349 Trihelix Transcription Factor Family AT5G38560 29.085 3.33e-23 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele42g0483 Pkinase 4.7e-15 CL0016