Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0481 ATGGCAAGTTGAAAATACAGCTACTCTGAGTTGAAAGAAGCAACAAGAGGTTTCAGTGAAGAGATTGGACGGGGTGCTGGAGGAATCGTATACAAGGGAACTCTAAAGGATGGGCGAGTTGCTGCAATCAAGAGACTCAACGAAGCAAATCAAATAGAAAGCGAGTTTCTCGCAGAAGTCAACTTAATAGGAAGGTTGAACCACATGAACTTGATTGACATGTGGGGGTATTGTGCAGAAGGAAAGTACAGAATGTTGGTGTATGAGTACATGGAAAACGGTTCTTTGGCAGAAAACCTCGAATCCAACAAGTCCCTTGATTGGAGAAAGAGATATGAAATCGCTCTTGGAACAGCAAGAGGACTTGCATATCTTCACGAAGAATGCTTAGAGTGGGTTTTGCATTGTGACATAAAGCCTCAAAACATACTTTTGGATTCAGATTATAAGCCCAAGGTTGCAGATTTTGGATTGTCGAAATTGCAGAACAGAAACGACCTCAACAATCCAAGTTTCTCAACAATAAGAGGAACAAGAGGATATATGGCACCAGAATGGGTTTTCAATCTACCAATAACTTCCAAAGTTGATGTTTACAGTTATGGAGTTGTAGTGTTGGAGATGATAACAGGAAAAAGCTTGAGGGTGGATGGACCAGATCACTCGCATCATGGGAGGCTAGTGACATGGGTGAGAGACAAGAAGACCAAAGGAGATGGAAAGGCATCATGGGTGGAACAGATTGTGGATCCGACGGTTGAGGGAAGCTTTGAGATGAGGAAGATGGAGGTTTTGATAACAGTGGCATTACAGTGTGTTGTGGAAGACAAGGATGCGAGACCTTCAATGAGTCGCATAGTGGAGATGCTTCAGAGTCATGAAATTGAGTAA 891 0.4265 MASXKYSYSELKEATRGFSEEIGRGAGGIVYKGTLKDGRVAAIKRLNEANQIESEFLAEVNLIGRLNHMNLIDMWGYCAEGKYRMLVYEYMENGSLAENLESNKSLDWRKRYEIALGTARGLAYLHEECLEWVLHCDIKPQNILLDSDYKPKVADFGLSKLQNRNDLNNPSFSTIRGTRGYMAPEWVFNLPITSKVDVYSYGVVVLEMITGKSLRVDGPDHSHHGRLVTWVRDKKTKGDGKASWVEQIVDPTVEGSFEMRKMEVLITVALQCVVEDKDARPSMSRIVEMLQSHEIE 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0481 296 ProSiteProfiles Protein kinase domain profile. 16 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0481 296 FunFam S-receptor-like serine/threonine-protein kinase 1 90 - -
Lele42g0481 296 CDD STKc_IRAK 22 291 - -
Lele42g0481 296 PANTHER OS07G0415500 PROTEIN 5 292 - -
Lele42g0481 296 SMART serkin_6 16 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0481 296 Pfam Protein kinase domain 19 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0481 296 SUPERFAMILY Protein kinase-like (PK-like) 5 291 IPR011009 -
Lele42g0481 296 FunFam Serine/threonine-protein kinase 91 296 - -
Lele42g0481 296 Gene3D Transferase(Phosphotransferase) domain 1 91 296 - -
Lele42g0481 296 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Lele42g0481 296 PIRSF ILK 18 295 - -
Lele42g0481 296 ProSitePatterns Protein kinases ATP-binding region signature. 22 44 IPR017441 GO:0005524
Lele42g0481 296 Gene3D Phosphorylase Kinase; domain 1 1 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0481 Lele-ChrLele42 4861921 4863643 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0481 5 291 Receptor kinase-like Gene Family AT1G60800 39.661 3.03e-66 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele42g0481 Pkinase 2.2e-53 CL0016